Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02635 ATGCTCACAACTTCATCTAATTCACTCATTGCATCTGCAATTAATTGGAAAAGAAAAACAGATAAGAAAAATTACATGAGAGTAAAGGTAGTGAACCTTGGAACTACCACTGAGAACCTTAACATTTCAATTTATGGATTGGAATCAAGTGTGCAGCAAATTGGTTCAACAAAGTCAGTGCTTACATCAGCTAATGTAATGGATGAGAATTCCTTCTTAGAGCCAAAGAAGGAGATTAATCATGCTGGTGCTGGGGGATTGTGGGCAGAGCTTGTGAACAACAGAGGTTTTGAAGCTGGGGGCACGCAAGTTCCATCAAATATTGACCCTTGGACCATAGTTGGACAAGAATCATCCATTTTAGTACAAACTGAACTTAGTTCTCTCTTTGAACGCAATAAGGTTGCATTAAGGATGGATGTGCTCTGTGACAAATGCCCTCCTGATGGTGTTGGTATCTCTAACCCAGGATTGAATTGCTTTGCATCTTCTAATGATGAAATCTTGTTTCAGAATATTGTGCAAGGGAAGAAATACAAAGTTGTCTTCTTTGTTCGTTCAACAGGGGCGCTAGATATGAAAGTATCATTCAGAAAAATAGAAGGTGGAGGGGTATTAGCTTCTAGTGACATCAAAGCTTCTGCACAAGAGATTTCAAACTGGAAAAGGATGGAGACTACATTGGTAGCTGATGCATCAAGTCCTAATGCAGCTATTCATTTAACAACAACCAGAAGAGGAGTGATATGGTTGGACCAAGTGTCTGCTATGCCTGTGGACACATTTAAGGGACATGGTTTCAGAAGTGACTTGGTTGACATGCTGGTAGAGTTGAAACCAGCCTTTCTCAGATTTCCAGGGCAAACACTAAGAAATGCATTCCGGTGGAAAGATAGTGTTGGACCCTGGGAACAGAGACCTGGACACTATGGTGATGTTTGGAGTTACTGGACAGATGATGGGTTAGGCTATTTTGAGGGTCTTCAACTAGCTGAGGACATTGGTGCAAAGCCATTGTGGGTATTTAACAACGGCATCAGCCATACTGATGAAATTAATCCTAATGTCATCACACCTTTCGTGCAAGAAGCACTTGAAGGTATTGAGTTTGCCAGAGGCCCAGCCACTTCAAAATGGGGTTCCCTTAGGGCATCTATGGGGCACCCACAACCTTTTGACCTAAAATATGTTGCTATCGGAAATGAAGATTGTGGGAAGCGATACTACCGTGGAAATTACATAGCATTTTACACTGCAATTCGACGTGCTTATCGAGATATTCAAATTGTATCAAACTGCGATGCTTCTGCAAAACCGTTAAACCATCCAGCTGATTTGTATGATTATCATACTTATCCTAAGGAAGCTCGAAAAATGTTTAATAACGCTCATGTGTTTGATAAGACACCACGCGATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGACACAAAGAAGCTAAGCTTGGAACCCTTTTGGGAGCAGTGTCTGAAGCTGGATTTCTTATTGGATTAGAAACAAACAGTGATCATGTGGCAATGGCTAGCTATGCACCACTTTTTGTAAATGCCAATGATAGGAAGTGGAACCCAGATGCAATTGTTTTCAACTCCCATCAGGCTTATGGAACTCCTAGCTATTGGGTGCAGCATATGTTTAGAGAGTCAAATGGAGCAACACTTCTCAGATCACAGCTTCAAACAGCTGATCCTAACTCAGTTGCAGCATCTGCAATTATTTGGCAAAATCCTCAAGATAAGAAAACTTACTTAAAAATAAAGGTTGCAAACTTGGGGAACAACCAAATGAATCTCAAGATTTCTCTTAAGGGATTTCTGAGCTCAAATCTAAAAGAGTCAACAATGACTGTGCTCACATCTGCAAATACATTTGATGAGAATAGCTTCTCAAACCCAAGAAAGATAACACCACAACAAAGTCCACTTCAGAATCCTGGCAATGAGATGAATGTGATACTCCCTCCAGTTTCAGTGACAGCATTTGATTTGTTAAAATAA 2025 0.4059 MLTTSSNSLIASAINWKRKTDKKNYMRVKVVNLGTTTENLNISIYGLESSVQQIGSTKSVLTSANVMDENSFLEPKKEINHAGAGGLWAELVNNRGFEAGGTQVPSNIDPWTIVGQESSILVQTELSSLFERNKVALRMDVLCDKCPPDGVGISNPGLNCFASSNDEILFQNIVQGKKYKVVFFVRSTGALDMKVSFRKIEGGGVLASSDIKASAQEISNWKRMETTLVADASSPNAAIHLTTTRRGVIWLDQVSAMPVDTFKGHGFRSDLVDMLVELKPAFLRFPGQTLRNAFRWKDSVGPWEQRPGHYGDVWSYWTDDGLGYFEGLQLAEDIGAKPLWVFNNGISHTDEINPNVITPFVQEALEGIEFARGPATSKWGSLRASMGHPQPFDLKYVAIGNEDCGKRYYRGNYIAFYTAIRRAYRDIQIVSNCDASAKPLNHPADLYDYHTYPKEARKMFNNAHVFDKTPRDGPKAFVSEYALIGHKEAKLGTLLGAVSEAGFLIGLETNSDHVAMASYAPLFVNANDRKWNPDAIVFNSHQAYGTPSYWVQHMFRESNGATLLRSQLQTADPNSVAASAIIWQNPQDKKTYLKIKVANLGNNQMNLKISLKGFLSSNLKESTMTVLTSANTFDENSFSNPRKITPQQSPLQNPGNEMNVILPPVSVTAFDLLK* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02635 674 Pfam Alpha-L-arabinofuranosidase C-terminal domain 480 666 IPR010720 GO:0046373|GO:0046556
Rops8g02635 674 SMART alpha_l_af_c 479 666 IPR010720 GO:0046373|GO:0046556
Rops8g02635 674 MobiDBLite consensus disorder prediction 638 657 - -
Rops8g02635 674 SUPERFAMILY (Trans)glycosidases 240 563 IPR017853 -
Rops8g02635 674 SUPERFAMILY Glycosyl hydrolase domain 546 670 - -
Rops8g02635 674 FunFam Alpha-L-arabinofuranosidase 1 254 556 - -
Rops8g02635 674 MobiDBLite consensus disorder prediction 638 656 - -
Rops8g02635 674 Gene3D Glycosidases 240 554 - -
Rops8g02635 674 Gene3D - 555 672 IPR013780 -
Rops8g02635 674 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 77 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02635 Rops-Chr8 59900897 59913195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02635 2 81 Glycoside Hydrolase AT3G10740 49.383 1.03e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02635 K01209 - gmx:100780771 963.37