Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02621 ATGGAAAGATCAACAACACCAATGAAGACCCTTGATTGCAACCTGACTCCAAAAACAACCACCTTGAGAGATAGAGACGCCTCTTTCTCATCTTATCTCACACCAGAAAAACCAATCACTAGCCAATGCCAACCACATCAACATCATCATCATCAAACCAATGGATCTGGACTATGTAGAATCGCTCTTGATGACTCCACCACCGAAGAGCTTAGCATATTCGATGCACACAAGTATTTCAATGAAGTTACCACCAACAATGACAGCCAAAAAGTTAGCATCAGTGGTGGAAACAGTAGAGTTTCTCCCATGGAAACTGAAAGGATTGTTCCAAGATACTCATCTGCTTCATCATCAGTAGATGGCTATGCCAACATCAGAAACTATAGAGCAGGTTCTTTCCATGCAGCAACACCAACAGCTTCATCTGAAGCCAGTTGGAACAGCCAAACAGGTTTGTTATCTCACCCTCCAGGTGCAATGTCAATCTCCATGAAAAACCCTCCAAATCCAAACTCAACCCATCTCAATAACAATAATCTCAAAACATCATTATCCAAACCCATATGGCTTTTAAGAAGAAAATGTCCATGCAGTGGTAAAAAATCAGTCCAAGTCAAAGAAAACAAAACACCACAACCCAAAACCCAAACCAACCATGAAACTAAACCCAAGAAGACAATGAACATGGGAACAGCTCATAATCATATCACAGTCACACCAAACAATTGGGTTATGGATAAGACACCACCACCACTACCACCACCACCAACAACAACAACAACCCTTGTTGCCACAAAGTCTCAAAGGCTATTCCCACCACACCAAGTGGTAACCACCTTGAGAGCACCCTTCAATGATGGCTTCACCTTCCCTATCCCAAACGGCATCGTTGAAGAAGATCCACCACGAGACTCACTAGAAGTTTTCCGACCACCGGACATCGAACCAAAACCCCTCGACTTCCCATTCAAAACCACCACCGAAGACGACGGAGACGGAGCTAGTGATGCAAGTTCCGACCTCTTTGAAATCGAGAGCTTCTCCACCACGACACAATCAACATACCCTATCATGTACCGTCGCAGTAGCAGAGACTCATTCGAAGAAGGTTCAACAATGACAGAGTGCTACGAACCAAGCGAGGCGAGCATTGAATGGAGTGTCACCACCGCAGAAGGGTATGATGAAAATGGTGGCAGTGGTGGCGGAGGGACGGCGGTGGAGCAGTGGAAGAAGAAAGGAGGGAAGAATAATGGGTTGTTGGTGAGTTGTCGGTGTGAGAAAGCGGTGAGTGTAGGGCCACAACCGGTGAAGTGTGGAACAACAACAGAGGGGGCCACAATAGGAACAACTTGGAGACATGTGAGTGTGATGAGTGGTAACAATAGTAGTAATAGTAGGGCAATAGGGAGTGTAAATAAACCACCACTTGCAAGGTCTCATCATCGTAACAACAACACACCTCGTGTGTCTCTTGCTTTCACGACATAG 1494 0.4538 MERSTTPMKTLDCNLTPKTTTLRDRDASFSSYLTPEKPITSQCQPHQHHHHQTNGSGLCRIALDDSTTEELSIFDAHKYFNEVTTNNDSQKVSISGGNSRVSPMETERIVPRYSSASSSVDGYANIRNYRAGSFHAATPTASSEASWNSQTGLLSHPPGAMSISMKNPPNPNSTHLNNNNLKTSLSKPIWLLRRKCPCSGKKSVQVKENKTPQPKTQTNHETKPKKTMNMGTAHNHITVTPNNWVMDKTPPPLPPPPTTTTTLVATKSQRLFPPHQVVTTLRAPFNDGFTFPIPNGIVEEDPPRDSLEVFRPPDIEPKPLDFPFKTTTEDDGDGASDASSDLFEIESFSTTTQSTYPIMYRRSSRDSFEEGSTMTECYEPSEASIEWSVTTAEGYDENGGSGGGGTAVEQWKKKGGKNNGLLVSCRCEKAVSVGPQPVKCGTTTEGATIGTTWRHVSVMSGNNSSNSRAIGSVNKPPLARSHHRNNNTPRVSLAFTT* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02621 497 MobiDBLite consensus disorder prediction 479 497 - -
Rops8g02621 497 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 17 457 IPR039615 GO:0009638
Rops8g02621 497 MobiDBLite consensus disorder prediction 201 228 - -
Rops8g02621 497 MobiDBLite consensus disorder prediction 474 497 - -
Rops8g02621 497 MobiDBLite consensus disorder prediction 204 228 - -
Rops8g02621 497 MobiDBLite consensus disorder prediction 310 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02621 Rops-Chr8 59719535 59721172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02621 - - tpra:123889734 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02621 8 59719535 59721172 Rops8g02621 8 59719535 59721172 ECH
Rops8g02621 8 59719535 59721172 Rops5g01829 5 38157605 38158753 PCT