Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02593 ATGAGTGACGACATATTTGATGGACAGATATTAACAGAGAAGTTGTTGAAGCTCAACAATTCCCAGCAAAGCATTGAATCACTATCCCGTTGGTGTATTTCTCACCGGAAGAGAGCAAAAGAAACAGTTGAAACATGGGAGAAATTGTTCAATGGATCCCAGAAAGAGCAGCGTGTCTCTTTTCTATACTTGGCCAATGACATCTTGCAAAATAGTAGGCGAAAGGGTAGTGAATTCGTCAATGAATTCTGGAAAGTTCTTCCAGCAGCTCTCAGACATGTTTATGAAAGTGGTGATGAACAGGGAAAGAAAGTAGTGACCAGACTTGTTGACATATGGGAGGAGAGGAAAGTTTTTGGTTCACGAGGTCAGGGTCTTAAGGATGAAATGATGGGTAAGAATCCTCTTCCATCCTCTGCAAGCAATGAAAAGAGTTCAAATTCTATCAAGATAGTGAAGAGGGATGGCCACTCAGTGAGAATAAAACTGGCTGTTGGATGTTTGCCTGAAAAAATAGTAGCAGCATTTCAGTCTGTGCTTGATGAACATCTTAATGAGGAGGAAACTGCCTTAAACAAGTGTAATGCTACTGTACGTGGTGTGGGTAAGCTTGTGGAAGATATTGAAAATACATTGGCTCAAGGAAACCGGCCAGGATCCACTTTTGTGAACGACTTGCAAGAGCAGGAAACAGAACTCAAACAATATATGGAACAACTTGAAAATGCTGAGGCTGCAAGGGCTTCTTTGCTTTCTCTGCTTAAAGATGCGCTGCAGGAACAAGAATCAAGGCAAGAGCTTGTTCACTCCCAGTTGCTAGTCGTACGAGGCCAGATTGAGAAAGCAGCTGGTATCAGGAAGCGGCTTAACCAAGAAGGAGAAACCATACTTCCATCAGTTAAAATAAACATAACCACTTCTCAACCTACTTTCACCCAAACTTCTATGTCATTTGCTCCTTTGCACACCACTGAAGATGATAACAAGAAGGCAGCAGCTGCTGCTGTTGCTGCCAAGCTTGCTGCCTCTACCTCATCTGCCCAGATGCTTACATCAATTCTTTCTTCTCTAGTAGCTGAAGAAGCTGCCTCCATGAATGGCTCTTCCTTTTTAGCCACCTTACAACAGCCATCGTTAACAAATGTGCCACTTGCACCCTCAGCCAGCATGCAAACCATGTCTCAAGCCAATCAATTACAAGCTGCATTTGCTCCCCCACCTCATTCTTCAGCAAATCAACTATCAAACCCATATGTCCAGTCAACTGGTTTGATGGTTGGGGGAATTCCTTATGGATATGGATCAAATAACCTTCCACCTCCACCTCCTTTGCCTCCACATGTGGCTATGGGGTTATCAATGCCCGGCACTCAACAAGCACAGCAGCAACAGCAACAGCAGTCATCGCCGGGAGGATTTTACCGGCCGCCCGGCATAGGGTTTTATGGGCAAAGCCACCCATCAACACCACCCCCAGTACCTAGACAGTGA 1491 0.4467 MSDDIFDGQILTEKLLKLNNSQQSIESLSRWCISHRKRAKETVETWEKLFNGSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPAALRHVYESGDEQGKKVVTRLVDIWEERKVFGSRGQGLKDEMMGKNPLPSSASNEKSSNSIKIVKRDGHSVRIKLAVGCLPEKIVAAFQSVLDEHLNEEETALNKCNATVRGVGKLVEDIENTLAQGNRPGSTFVNDLQEQETELKQYMEQLENAEAARASLLSLLKDALQEQESRQELVHSQLLVVRGQIEKAAGIRKRLNQEGETILPSVKINITTSQPTFTQTSMSFAPLHTTEDDNKKAAAAAVAAKLAASTSSAQMLTSILSSLVAEEAASMNGSSFLATLQQPSLTNVPLAPSASMQTMSQANQLQAAFAPPPHSSANQLSNPYVQSTGLMVGGIPYGYGSNNLPPPPPLPPHVAMGLSMPGTQQAQQQQQQQSSPGGFYRPPGIGFYGQSHPSTPPPVPRQ* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02593 496 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Rops8g02593 496 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 7 493 - -
Rops8g02593 496 MobiDBLite consensus disorder prediction 454 472 - -
Rops8g02593 496 Pfam CID domain 10 121 IPR006569 -
Rops8g02593 496 SUPERFAMILY ENTH/VHS domain 17 119 IPR008942 -
Rops8g02593 496 CDD CID_RPRD_like 9 131 - -
Rops8g02593 496 Coils Coil 223 260 - -
Rops8g02593 496 MobiDBLite consensus disorder prediction 125 147 - -
Rops8g02593 496 FunFam ENTH/VHS family protein isoform 1 3 131 - -
Rops8g02593 496 MobiDBLite consensus disorder prediction 436 496 - -
Rops8g02593 496 MobiDBLite consensus disorder prediction 390 416 - -
Rops8g02593 496 Gene3D - 5 134 IPR008942 -
Rops8g02593 496 SMART 558neu5 10 131 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02593 Rops-Chr8 59316837 59339112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02593 K15559 - gmx:100800067 676.781