Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02562 ATGTCTCTGGCAGTTTCCTCACCAAAATGGCTGAGCAATTGTGCTCGTGTGGTCAACTCATTCATATGTTTCCTTGTTTTTTTCATATTTGATCTTCTTGATGCTGTTCTCTGCCTTATCTATAGATACCTTGATGAGAGAATTGAAGGGAAGGCCTCCCCTTGTTGCTGCTCTAAATGGGAAAGGCAGAAGAAGATGATGAATTGTGAAGATAATGGTCAATCAGATAGCTTGTATGGGAGGAAGAGCATTTTCAGAGAAATGGGTTTTCTTCAATTTGGAAGAAAAAAGGAAGATTCCAATAGAAAAAGTGGTGAAGTTGGTGGAAGGACAATGAACCGTTGGTCTGATTGTGGGTGTGAGTCTTGCCTTTCATGGATGAATGATGGTGGTGACTATGAACTTCATTTTGTTGTGAGAGAGCCCTTTATCGCCACTAGTGAGAACTGCAGGGGAACCCCTTCTGAGAATGTCATATTCTTGCATGGATTTATGTGTTCTTCCTCATTTTGGACAGAGACTGTGTTTCCATATTTCTCTGAAAAAGTAAATCATAATTACCGATTAATTGCCATAGACCTTCTGGGATTTGGCAAGAGCCCAAAGCCAAAAGATTGCTTGTACACTTTGAAGGATCATGTGGAAATGATTGAGAAATCAGTGATTCAACCAATGCAATTAAGTACTTTCCATTTGGTTGCACACTCTATGGGTTGCATAATTGCATTGGCCTTGGCTGCAAAGTACCCCAAGTGTGTTAAATCAATCACCCTTGTTGCACCTCCATACATTTCTTCTGAGGGCAATGATGCTTGTTTAAATGCACTTACAAAGCTTGCTGGAAAGAAATTGTGGCCCATCTTGTCATTTGGTTCTTCATTTATGTCATGGTATGAGCACTTGGGTCGAACTGTTTGCCTTATCTATTGCAGAAATCACAGGATATGGGAGAGGATTCTAAAATTCTTTACTCGCAAGAGGGATCTTCATTTCACGATCATAGACTTGACTAGGCATACCCATCATTCAGCTTGGAGTTCCATGCATAATGTGATATGTGGGGGAGCAAAATTTATGGATAGTTACCTGAAAATCTTGACCAAAGAAGGGGTTAGAATAAATGTTATACAAGGTGATAAAGATCAGGTTGTACCAGTGGAGTGCTGCAGCAATTTCAAGTTGAATGCTCCAAATGCTGAAATTAACATCATTCCAAACGCAAACCACAGCACTGTGCTTTTTGTCAGAGAGAAGGAATTTGCATATAGTTTGGAGCATAAATGGGAATCTTGCTCTTGA 1299 0.4003 MSLAVSSPKWLSNCARVVNSFICFLVFFIFDLLDAVLCLIYRYLDERIEGKASPCCCSKWERQKKMMNCEDNGQSDSLYGRKSIFREMGFLQFGRKKEDSNRKSGEVGGRTMNRWSDCGCESCLSWMNDGGDYELHFVVREPFIATSENCRGTPSENVIFLHGFMCSSSFWTETVFPYFSEKVNHNYRLIAIDLLGFGKSPKPKDCLYTLKDHVEMIEKSVIQPMQLSTFHLVAHSMGCIIALALAAKYPKCVKSITLVAPPYISSEGNDACLNALTKLAGKKLWPILSFGSSFMSWYEHLGRTVCLIYCRNHRIWERILKFFTRKRDLHFTIIDLTRHTHHSAWSSMHNVICGGAKFMDSYLKILTKEGVRINVIQGDKDQVVPVECCSNFKLNAPNAEINIIPNANHSTVLFVREKEFAYSLEHKWESCS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02562 432 Gene3D alpha/beta hydrolase 136 428 IPR029058 -
Rops8g02562 432 Pfam alpha/beta hydrolase fold 158 261 IPR000073 -
Rops8g02562 432 PRINTS Alpha/beta hydrolase fold signature 186 201 IPR000073 -
Rops8g02562 432 PRINTS Alpha/beta hydrolase fold signature 246 259 IPR000073 -
Rops8g02562 432 PRINTS Alpha/beta hydrolase fold signature 232 245 IPR000073 -
Rops8g02562 432 SUPERFAMILY alpha/beta-Hydrolases 152 412 IPR029058 -
Rops8g02562 432 PANTHER HYDROLASE 122 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02562 Rops-Chr8 58725853 58728078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02562 17 431 Acyl Lipid Metabolism Gene Families AT5G17780 51.435 9.64e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02562 - - ccaj:109802537 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02562 8 58725853 58728078 Rops8g02562 8 58725853 58728078 ECH