Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02560 ATGGGCGGCGCCGCCCCAAGGTTCCTCTTCCTCCTCACCACTCCGCTCCCTCTTCTCCGCCGTAACCTCTCTCACTCTCTCTCCTCCCATTTCTACCATCGCCTCTCTTCTTTATCTTCCTCTCTTTCTTCTCCTTCTCTCTCTCTAAAACCCAAACTCAAGCTCAAAATCAAAGCCTCTTCTCAACACTTTCACACTCAATCTCCCTCTCCCTCTTCCTCCTTCACCACTCACCCCTGGCCAGAATGTTCTAGATTCCTCTCTCATATCTCATCCTCTGGCTACGCTGCCACTAATATTCCCGACGATGGCTTCGCCTACACCGGGGAGTTGTTGTCACGGCGCGAGGCTAGTGCCTGCTTGGCCTTTGCTCGCGACAGACCTAACCTACTGCGGTTGCTTTCGATGAGAGACATTGCGGTTGTGGTTGAACATGGAGCTCCCTTTCTGTTCCCGGACGCTGAGGATTCTGTTAGGAAGATGAAGTCCTTTGTTTCCAACGGTGACGCCGCTGTGTTGGAAACTGATAGAGCAAATATGCTTGATCTAATGAAGTTTATGCTGAGTTATGCAAGCAACCCATTGGTCTCGTCAGAAAGGAACAGAGATCTTGTTGAATCATCTGTCAGAAATCTGTTTGGTGAACTTTTCAAGCTGAGTTATAATGCACCTGGAGCTAACTCTTTTGATTCAATGCAAAAGCAAACGCCTGGTAGATATGGACAGACAATGCCCCCTGGACCAAAAATTGAAATGAAACGGGGTGATTGGATTTGCCCAAGGTGTAATTTCATGAATTTTGCAAGAAATATTAAATGTCTTGATTGTGAGGAAGCAAGGCCAAAAAGACAACTGACTGGAGGAGAATGGGAATGTCCTCAGTGTGATTTCTATAACTATGGGAGGAATACGACTTGCTTAAGGTGTGATTGCAAGCGGCCTGGACAAATATCTTTGGGTGCCACCAATACCATCACAAATATGGGGTATGGAAATGGAAACGTAAACAATTCTAATACTTCAGATATTGATACTAGATTAGCTGCTAATGAAGAGAAGGCGCAGCGTTGGTTTAGCAAAGTTTCTCAACTAGACACCAATGCTGATATTGACAGTGTGATAGCAGATGAAGATTTTCCAGAAATAATGCCATTAAGGAAAGGAGTTAATAGATTTGTTGTAAGCACGAGGAAAACTCCATTGGAGAGGAGGTTGGCCAATGCTCAATACAAGAGAAACTTGGGAAATAACGGCACCCCTGGGGTCGAGGATTTTAAAGCTGGGGAGTCAACCAAGTCCCATGATTATCTGGATGACATTCTGGGTCGTTCATCTGACCTTCCTCAATCTGACAATAAAAACATTGTTGGTGAACAAAATACCAGTAGAGACGGCGCACCTTCGATCGCTAACAATACTTCACATTTCAATGATGTAAAAGCAAGCAACAATACTACTGTTCGTCCCTCTCCGTTGTCTGCAGATATGTTTGCCCCGAAGTCTGAGAACTTGCGGGCAGGGGAGAGCAAAAAAGTGGAATTAGGCACTGATGTTGGATATGCCAGTTCTGGTGACAGCCGACAGGTTTCTAATAAGTCTACAACCGAAAATGTCATCAAGGATAAGGAGACAGAGCAAGATGAAAAATCTGAGAGGTGGTTTAGAAAGGTTGCAGAGTTGCATGATGTTCCAGATTTAACAAGTGCAATATCCAATGAGGATTTCCCTGAAATAATGCCCATGCGTAAAGGAGAAAATCGATTTGTTGTTAGCAAGAAAAAAGATCGCTCCTTGACTACACCAGCATACAAGAGACGTTTGGCCATGGAACAATCTGGCAACACCAACTTTGTCCCCTTTGTCCCTTTCCCCCCAGATTACTTTGCCAAAAAGGACAAACAACAGGCAGATGGAACAGATTCATCTGGTAGGTCCAATGTCGAATCATCTTCAACATCTGAAGTAGCTGACATGTCAGATGATGCTAGAGCTACTAGACCTGGACACAGTCCAAAACCTTCTGAACAGAGCTCAAATAACAACAATCATGTGGGTTCTATTCATGGGGTGACAAGCAGTGTAAATTCAAGCCAGAGTTCCAATCAAGATCATGTGCCAAACTTGACAGGGAGTTCACCACCTGCCTCAGCATCTGAGAACCAGAGTGTTAAAGCAGAATGGACAGGGAAGAGTTTGGAGGGGTCAGCTGTGAGGGAACCAGATCCTCTGGACATGTCAGAGGAGGCAAAGGCAGAGAGGTGGTTCCGTCGCGTTGCGCAGATCAAGGATATCTCCGAGCTCAGTCAGATTCCAGATGAAGATTTCCCTTCTATAATGCCTATGCGCAAGGGGGTGAACAGGTTTGTTGTGAGCAAGAGGAAAACACCATTGGAAAGAAGATTGACATCTCAGCAGTACCGAAGAAATCTTCCAGTTGTGAACTCAGATCCGGATAAAAGAGAAAATGAAGGTAGCTGA 2478 0.4516 MGGAAPRFLFLLTTPLPLLRRNLSHSLSSHFYHRLSSLSSSLSSPSLSLKPKLKLKIKASSQHFHTQSPSPSSSFTTHPWPECSRFLSHISSSGYAATNIPDDGFAYTGELLSRREASACLAFARDRPNLLRLLSMRDIAVVVEHGAPFLFPDAEDSVRKMKSFVSNGDAAVLETDRANMLDLMKFMLSYASNPLVSSERNRDLVESSVRNLFGELFKLSYNAPGANSFDSMQKQTPGRYGQTMPPGPKIEMKRGDWICPRCNFMNFARNIKCLDCEEARPKRQLTGGEWECPQCDFYNYGRNTTCLRCDCKRPGQISLGATNTITNMGYGNGNVNNSNTSDIDTRLAANEEKAQRWFSKVSQLDTNADIDSVIADEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYKRNLGNNGTPGVEDFKAGESTKSHDYLDDILGRSSDLPQSDNKNIVGEQNTSRDGAPSIANNTSHFNDVKASNNTTVRPSPLSADMFAPKSENLRAGESKKVELGTDVGYASSGDSRQVSNKSTTENVIKDKETEQDEKSERWFRKVAELHDVPDLTSAISNEDFPEIMPMRKGENRFVVSKKKDRSLTTPAYKRRLAMEQSGNTNFVPFVPFPPDYFAKKDKQQADGTDSSGRSNVESSSTSEVADMSDDARATRPGHSPKPSEQSSNNNNHVGSIHGVTSSVNSSQSSNQDHVPNLTGSSPPASASENQSVKAEWTGKSLEGSAVREPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPVVNSDPDKRENEGS* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02560 825 MobiDBLite consensus disorder prediction 519 547 - -
Rops8g02560 825 PANTHER ZINC FINGER PROTEIN 44 438 - -
Rops8g02560 825 SUPERFAMILY Ran binding protein zinc finger-like 249 282 IPR036443 -
Rops8g02560 825 ProSitePatterns Zinc finger RanBP2-type signature. 257 276 IPR001876 -
Rops8g02560 825 Gene3D - 284 316 - -
Rops8g02560 825 Gene3D - 247 283 - -
Rops8g02560 825 ProSiteProfiles Zinc finger RanBP2 type profile. 286 315 IPR001876 -
Rops8g02560 825 SMART zf_4 255 279 IPR001876 -
Rops8g02560 825 SMART zf_4 288 312 IPR001876 -
Rops8g02560 825 MobiDBLite consensus disorder prediction 439 494 - -
Rops8g02560 825 ProSitePatterns Zinc finger RanBP2-type signature. 290 309 IPR001876 -
Rops8g02560 825 MobiDBLite consensus disorder prediction 670 728 - -
Rops8g02560 825 MobiDBLite consensus disorder prediction 639 658 - -
Rops8g02560 825 ProSiteProfiles Zinc finger RanBP2 type profile. 253 282 IPR001876 -
Rops8g02560 825 MobiDBLite consensus disorder prediction 796 825 - -
Rops8g02560 825 Pfam Zn-finger in Ran binding protein and others 254 281 IPR001876 -
Rops8g02560 825 Pfam Zn-finger in Ran binding protein and others 288 314 IPR001876 -
Rops8g02560 825 MobiDBLite consensus disorder prediction 445 491 - -
Rops8g02560 825 MobiDBLite consensus disorder prediction 521 535 - -
Rops8g02560 825 MobiDBLite consensus disorder prediction 615 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02560 Rops-Chr8 58717738 58723766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02560 77 319 EF-hand Containing Proteins AT1G55040 33.898 2.60e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02560 - - gmx:100775801 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02560 8 58717738 58723766 Rops8g02560 8 58717738 58723766 ECH