Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02559 ATGATGCTAGCATATATCCGAATAAATCCACCTAAGCCCGATCTCTTGTGGAGACCGTTAATTCAGAGGCGAGGAAGGAACCGGAGCCACTCGGTTTGTCCACTCGGTCGGGAACAAGAAGCAACCGAACGGGTTCTCTCCTTCTCCCACTTCACTCTTAAACAAAACACAATTTATTCAATTCCGGCTGAGGTGACAAAAGCTATGGCCTCCAAGCTGATTTTGCAGAGAAGGGTCTTCAGGTTCTTGCAACTTTCACTATCCTCTTCACACTCTTCTTCTTCTTCTTCCCCCATTCATGGGGCACGATTCCTTTCTGTAAAAGCATCGGAAATTGTGGGTCTCTCCAAGGGGAATGTTCATCTTCCTCCTCATTCAATATCTTATAGAAACTTCTGCTCTCGGAATGCAAATACTCTTGATGAATCTCAAGGCCCTGCAACTATTGATTACCGTTCTCTACTGCAGGAGGGTGAATTCCACAGACTGGCTGATTCCACAATACATAGCCTTCAAGAGAAATTAGAGGACTATGGAGACTCGGTTGAACTTGATGGATTTGACATAGACTATGGGAATGATGTTTTGACTGTAAAACTTGGTGACCTGGGCACCTATGTATTGAACAAACAAACACCAAATAGACAACTTTGGCTGTCATCTCCAGTGAGTGGTCCTTCAAGGTTTGATTGGGATCATGATGCGAAAGCTTGGATTTATAGGCGGAACAAAACAAACTTGTATACAATTTTAGAAAATGAATTGGGGCAGCTGTGTGGCAAACCTATTGTTCTCTCTTAA 801 0.4345 MMLAYIRINPPKPDLLWRPLIQRRGRNRSHSVCPLGREQEATERVLSFSHFTLKQNTIYSIPAEVTKAMASKLILQRRVFRFLQLSLSSSHSSSSSSPIHGARFLSVKASEIVGLSKGNVHLPPHSISYRNFCSRNANTLDESQGPATIDYRSLLQEGEFHRLADSTIHSLQEKLEDYGDSVELDGFDIDYGNDVLTVKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDHDAKAWIYRRNKTNLYTILENELGQLCGKPIVLS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02559 266 ProSitePatterns Frataxin family signature. 207 221 IPR020895 -
Rops8g02559 266 FunFam Frataxin, mitochondrial 148 266 - -
Rops8g02559 266 NCBIfam iron donor protein CyaY 157 264 IPR002908 GO:0008199|GO:0016226
Rops8g02559 266 CDD Frataxin 155 263 - -
Rops8g02559 266 NCBIfam frataxin 159 256 IPR017789 GO:0004322|GO:0005739|GO:0006879|GO:0018283
Rops8g02559 266 PRINTS Frataxin signature 193 208 IPR002908 GO:0008199|GO:0016226
Rops8g02559 266 PRINTS Frataxin signature 155 173 IPR002908 GO:0008199|GO:0016226
Rops8g02559 266 PRINTS Frataxin signature 208 223 IPR002908 GO:0008199|GO:0016226
Rops8g02559 266 Gene3D Frataxin/CyaY 147 266 IPR036524 GO:0008199|GO:0016226
Rops8g02559 266 ProSiteProfiles Frataxin family profile. 155 263 IPR002908 GO:0008199|GO:0016226
Rops8g02559 266 PANTHER FRATAXIN 110 265 IPR002908 GO:0008199|GO:0016226
Rops8g02559 266 SMART Frataxin_Cyay_2 155 266 IPR002908 GO:0008199|GO:0016226
Rops8g02559 266 SUPERFAMILY Frataxin/Nqo15-like 145 263 IPR036524 GO:0008199|GO:0016226
Rops8g02559 266 Pfam Frataxin-like domain 156 262 IPR002908 GO:0008199|GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02559 K19054 - gmx:100815916 277.33