Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02545 ATGGCCATGGTGAACAATTTTAACATCACCACACAACCACAGATCACCCAAGTACAAGTTCAACAGCACAGGCTTCCATTCACAAACCCCATCAAGGCACAAGAATCAAGCTTTCCAAACAGAACAACAGTGGCGGGACAAACAGTGAGAAGGGTATTTCAGATTCTCTTCTACTTGCATCTAGTCCTGATTGCAGTCTTGGTGATTTTCCTTACCATATATGGTCTTGTCTCGGATTCTCACACCCACCATTTTCACCCTGAGAAGTGGTACCCCCCACTTCTAGCATCAACAGCATGTGCTGGATTTCTTGGTTTCACATGGCAATTGATCACTGCCAGACACCCCACAAAGGCATTGAGGGCAGCATTCTGGCTAAGTCCATTGCTAACATGTGCAATGGGAATTCTATTTGTGTGCATTGGCACTGCAGTGAGTCTGGCAGCTGGTATAATTGCTTTGGTTTCTGCATTAATTCAGTCCCTCTATGGATGTTGGGCCAGTCCCAGATTTGAATATGCCACCAGAATCTTGTCAGTTTCAATAGCTTTTCCTCCTACTAAAACCAAGGGGTTAGCACTTTCATCAATCCTTATTGGTCTCCTTTACTGCTGTTTTCTGGTTTCTGGGATTGGAGGAGCTAGAGCTGTTGAAAACAGAACCAAACTAGCAGCTTTTTTTATCTTGGTGATCCTGCTGAGCCTGGGATGGACTTTGCAGTTTCTGAAGAATGCAATGCAAGTCACCATTTCAAGGGTCAAGTATATGCATTTTGCTGGAGGAGTTGACATGGACACTAGAGTGGCATTTTGTGACACAATCAAGTACTTAACTGGAAGTGTTTCCCTAGGTTCCATCCTTGTCCCCATCATTGGACTCTTTAGGGGTTTTGCAAGATCAACGAGTCTGGTTGGAGGAAATACAGATGAGTTCATGTTTTCCTGTGTTAGTTGTTACATGGGGATTGCATCTCTTCTAGTGACTTGTGGAAACCGATGGGGTTTTGTCCATGTTGGAGTTTATAACAAGGGGTTTGTGCAGGCATCTTCTGATACTTGGGAGATGTTTATTAGAGTTGGAATGGAACAACTGATAGACTTAGATCTCACTGGAGCCTTTTGCTTCTTTAGTGGGGTTGCAATAGGTGCAATATGTAGTATGGTGAGTGGAGTTTGGAGCCTTGTAATACACAAGAGCTATGCCATTGAAGTGTCCATTTATGCTTTCCTCATTGGCTATTTCATGTGTCGATTGGCTATGGCTTGGCCACAAGCATGTGTTTCGGCTTACTATGTTGCCTATGCAGAGAACCCACAGAGCACTCGATTTGACTCAACTATTCCAGTACGCTTGGAGCAGCTTCACAGATCTCAAGCTTTGCAAATATCCTGA 1392 0.4397 MAMVNNFNITTQPQITQVQVQQHRLPFTNPIKAQESSFPNRTTVAGQTVRRVFQILFYLHLVLIAVLVIFLTIYGLVSDSHTHHFHPEKWYPPLLASTACAGFLGFTWQLITARHPTKALRAAFWLSPLLTCAMGILFVCIGTAVSLAAGIIALVSALIQSLYGCWASPRFEYATRILSVSIAFPPTKTKGLALSSILIGLLYCCFLVSGIGGARAVENRTKLAAFFILVILLSLGWTLQFLKNAMQVTISRVKYMHFAGGVDMDTRVAFCDTIKYLTGSVSLGSILVPIIGLFRGFARSTSLVGGNTDEFMFSCVSCYMGIASLLVTCGNRWGFVHVGVYNKGFVQASSDTWEMFIRVGMEQLIDLDLTGAFCFFSGVAIGAICSMVSGVWSLVIHKSYAIEVSIYAFLIGYFMCRLAMAWPQACVSAYYVAYAENPQSTRFDSTIPVRLEQLHRSQALQIS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02545 463 Pfam Plasma-membrane choline transporter 134 438 IPR007603 GO:0022857|GO:0055085
Rops8g02545 463 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 26 457 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02545 Rops-Chr8 58276518 58278629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02545 - - var:108328067 773.081