Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02538 ATGATGGTTGTGAAGGGTGGGAATGGTGGTGGAAGATTGTTACGTGGATTTGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCTGTTCATGTGAGGGGACATGCTCAATTGGCTAGGAAGTTATCTGCTGTTGATCTTGTTGCAATAGGGGTTGGAGCTACTATTGGAGCTGGAGTGTATATTCTAATTGGAACAGTTGCTAGAGAGCAGGCAGGACCAGCACTTCTTGCATGTCGATGCCCATCTGCAGGGAGTGCTTATCATTATACATACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTTGGTTGGTCCCTGATTCTAGAATACACAATTGGTGCTTCGGCTGTTGCTCGTGGCATAACCCCAAATCTGGCCTTGTTTTTTGGTGGTGAGGAAAACCTACCTTCAGTTTTGGCTCGCCATACCTTACCAAGTCTTGGAGTTGTGGTTGATCCATGTGCAGCTGTATTAATTCTTCTTGTTACCGTACTGTTGTGCCTTGGAATCAAGGAGAGTTCAATGGTACAATCCATTGTTACAACAGTAAATGTCTGTGTCATGCTTTTCGTCATTATAGTTGGTGGATATCTAGGTTTCAAGTCTGGATGGGTTGGATATGAACTCCCAAGCGGGTATTTTCCTTATGGAGTGAATGGGATGTTTGCTGGGTCTGCAATACTTTTCTTTTCATATATTGGTTTTGATTCAGTGACCAGCACAGCTGAGGAGGTCAAAAATCCTCAACGAGATTTGCCAATTGGCATATCAATTGCATTAGCTATATGTTGCATTCTGTATATGCTTGTATCAGCAGTTATTGTTGGCTTAGTACCATATTATGCGTTAGACCCTGATACCCCAATCTCCTCAGCATTTTCTAGCTATGGGATGGACTGGGCAGTGTATATAATAACAACTGGAGCTGTCACTGCTCTTTTTGCCAGTTTGTTGGGTTCAGTTCTTCCCCAGCCACGGGTTTTTATGGCAATGGCTAGGGATGGTTTGTTGCCCTCTTTCTTCTCAGATATCCATAGAGGCACACAGATTCCTTTGAAAAGCACTATTGTCACTGGTGTCTTTGCAGCTACTCTTGCATTCTTTATGGATGTTTCCCAGTTAGCAGGGATGGTTAGTGTGGGAACATTGCTTGCATTTACCACCGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCTCCTGATGAGGTACCCATTCCGTCTTCACTGCTAACATCTGTAGATCCATTAGTGAAGCATTCTGGTGGTGATGCTGAGGAAGATATGGCCATAAGTCCTGTAGATCTTGCCAGTTATTGTGGGAATAGTCACCTACATGACAAATCAGAGGTTCTGCTTGGACATCCTTTAATCATAAAAGAAGAAACCAAAGATGAACAGAATGAGAAAACTAGGCGAAAACTTGCTGCATGGGCCATAGCCCTTCTATGTATAGGGATTCTCATAGTTGCCAGTGCAGCTTCAGCTGAATGGTGTCCCAGGATTTTGTGCTTAACGTTGGGCGGAATGGGTGGAATTCTTCTTTTGTGCAGTATAATTGTGCTGGCATGCATAAAGCAAGATGATACGAGGCACAGCTTTGGTCACTCAGGAGGTTTTGCTTGCCCATTTGTGCCATTCTTACCTGCTGCTTGCATTCTTATAAACACCTACTTACTAATTGATCTTGGAGTTGCTACATGGCTACGAGTTTCAGTATGGTTGTTGATAGGAGTACTTATATACTTGTTCTATGGCCTCAGCCACAGCTCATTGTTAAATGCAACCTATGTTCCCTCAACATGTGCTGATGAGATTCATCGTACTCAAGCAATTCATCTAGCCTAG 1848 0.4324 MMVVKGGNGGGRLLRGFGSLIRRKQVDSVHVRGHAQLARKLSAVDLVAIGVGATIGAGVYILIGTVAREQAGPALLACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEENLPSVLARHTLPSLGVVVDPCAAVLILLVTVLLCLGIKESSMVQSIVTTVNVCVMLFVIIVGGYLGFKSGWVGYELPSGYFPYGVNGMFAGSAILFFSYIGFDSVTSTAEEVKNPQRDLPIGISIALAICCILYMLVSAVIVGLVPYYALDPDTPISSAFSSYGMDWAVYIITTGAVTALFASLLGSVLPQPRVFMAMARDGLLPSFFSDIHRGTQIPLKSTIVTGVFAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPIPSSLLTSVDPLVKHSGGDAEEDMAISPVDLASYCGNSHLHDKSEVLLGHPLIIKEETKDEQNEKTRRKLAAWAIALLCIGILIVASAASAEWCPRILCLTLGGMGGILLLCSIIVLACIKQDDTRHSFGHSGGFACPFVPFLPAACILINTYLLIDLGVATWLRVSVWLLIGVLIYLFYGLSHSSLLNATYVPSTCADEIHRTQAIHLA* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02538 615 PIRSF AA_transporter 465 597 - -
Rops8g02538 615 PIRSF AA_transporter 20 407 - -
Rops8g02538 615 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 20 591 - -
Rops8g02538 615 Pfam C-terminus of AA_permease 540 590 IPR029485 -
Rops8g02538 615 Pfam Amino acid permease 76 403 IPR002293 GO:0016020|GO:0022857|GO:0055085
Rops8g02538 615 Gene3D Amino acid/polyamine transporter I 37 414 - -
Rops8g02538 615 Gene3D Amino acid/polyamine transporter I 464 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02538 Rops-Chr8 58101936 58115280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02538 18 615 Organic Solute Cotransporters AT3G03720 63.023 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02538 K13863 - gmx:100816704 1037.71