Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02530 ATGAAGGTGGTGGCGCTTGTTAGCGGCGGCAAAGACAGTTGCTATGCCATGATGAAGTCCATTCAATATGGCCACCAGATTGTTGCATTGGCGAATTTGATGCCGGTTGATGATTCCGTGGACGAGCTCGATAGTTACATGTACCAAACTGTTGGGCATCAAATTATCATCAGCTATGCTGAATGTATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGATCTACAAGACATCAGGAGCTTGGTTACAAAACAACTCAAGGTGATGAAGTCGAAGATATGTATATCTTGTTACGTGAAGTGAAAAGGCAGATACCCTCAGTTACTGCAGTGTCTTCTGGAGCCATTGCATCTGACTATCAGAGATTGCGGGTGGAAAGTATTTGTTCAAGGTTAGGCCTTGTTTCTCTGGCATTCTTATGGAAACAAGATCAGTCCTTGCTCCTCCAGGAAATGATTGCAAATGGAATTGTAGCTGTAACTGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAAATAGCCTTGTTAAATGCTTATTTGCATAAATTGAAAGAGTTATATGGAATCAATGTTTGTGGTGAAGGAGGGGAATACGAAACATTAACTCTTGATTGCCCGCTCTTTATTAATGCTCGCATTGTGCTTGATGAATATCAAGTTGTGATGCACTCTTCAGATTCCATAGCTCCTGTTGGAATCCTTCATCCCTCTGCATTTCATTTGGAAAAGAAGGCAGACATTCAGTCTTTAAAATTAGAAGACAAAATACAAGAGATTTGTAAGGAGAAACTGGGATCTGTGTTTGAAGTGCATGACAGTCTAGAAAGATGTGAAGTGACGTGCAAGCCTATGGATTATAATGCTGATTCAATTGATGGCGTAGAACATAAATTTAACATTTCAAGAACAAATAACAAGAGCACATTCTCCATATGTTGCTGGTTTCAAGATTCATGCAATGGTTTGCAGGAAGATTTGAAGATTGTTTTGGGTAAAATTGAATCACAACTAGTGGGCTTTGGTTTTGGCTGGGAAAATGTCCTCTATATTCACCTTTATATTGATGACATGGATAAGTTCTCCGAGGCAAATGAGACATACGTGAAGTTTATAACACAGGAGAAGTGCCCATTTGGTGTCCCATCCCGTAGTACGGTTGAAATGCCCCTAGTGGAAATGGGTTTAAGCAGGGCATACATGGAAGTTTTGGTAGCAAAAAATAAAGCTAAAAAGGTTTTGCATGTGCAGAGTATTTCCTGTTGGGCACCTAGTTGCATAGGGCCCTACAGCCAGGCAACATTGCATGAGGGTATACTTCACATGGCTGGTCAGTTGGGGCTCGACCCTCCTACGATGAATCTTTGCAATGGAGGCCCTGTTGTTGAACTGGAACAGGCACTAAAAAACAGTGAAGCAGTGGCAAAATGCTTTAATTGTTCAATATCTACATCTGCAATTGTTTTTGTTATTTACTGTTCTAAATGTCTCTCGTCATTGGAGAGACTTGATATTCAGATGAAACAAGAAACAATCCTTAGGCAGATGAAGATCTCCAATTTACAGGAAGGAAACATGCACAAAACATTAGAACCCATGTTCCTTTATGTCCTTGTTCCTGATCTACCTAAAAGAGCGTGTGTAGAAGTAAAGCCTATTCTTTATGTTGAGGATGGCACAGATGCGGTGATTGAGACCATAAAAGAAAGATCATGTTCAAAGGCATCATGTTATTGGGGTTTCAAGCAGGAAAATTGGCATGATTCCTGCATTCAGAAATGTGTGATTTCTGGAAAGATATGTGCCGTTGTACTGTCTATTACAAGTGAGCTGGCTGCAAAGATATGTTCTGATTCTCCACCTGCTGATTATGTCAATAATGATCAACATTCTCTCCCTAAGGCCCATATGGAGAAGTTATCAAAGTTCTGCATCTATCTTCTTGACAAAGTTATAACAGATAATGACTTTGCCTGGGAAGATATAATGAGTTTGAGGTTCTATGTCCCAGCGAGCCATCAAATGTCAGTGGAGCTATTACAGCCTATGTTCAGCAATGCACCTTCTGAACTTTCTGAAATGAGTCAGAAGAAAATTAAAAATGGTGAGGAGCCAATCTTCAACATAGTTCCTGTCATAGGTGCAGGGAGGTCTGCTTCATCCATGGATGATGTAGTAACCTGTGAGTTACTGGCTCGGAAATACTGA 2223 0.408 MKVVALVSGGKDSCYAMMKSIQYGHQIVALANLMPVDDSVDELDSYMYQTVGHQIIISYAECMGLPLFRRRIQGSTRHQELGYKTTQGDEVEDMYILLREVKRQIPSVTAVSSGAIASDYQRLRVESICSRLGLVSLAFLWKQDQSLLLQEMIANGIVAVTVKVAAMGLDPAKHLGKEIALLNAYLHKLKELYGINVCGEGGEYETLTLDCPLFINARIVLDEYQVVMHSSDSIAPVGILHPSAFHLEKKADIQSLKLEDKIQEICKEKLGSVFEVHDSLERCEVTCKPMDYNADSIDGVEHKFNISRTNNKSTFSICCWFQDSCNGLQEDLKIVLGKIESQLVGFGFGWENVLYIHLYIDDMDKFSEANETYVKFITQEKCPFGVPSRSTVEMPLVEMGLSRAYMEVLVAKNKAKKVLHVQSISCWAPSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCNGGPVVELEQALKNSEAVAKCFNCSISTSAIVFVIYCSKCLSSLERLDIQMKQETILRQMKISNLQEGNMHKTLEPMFLYVLVPDLPKRACVEVKPILYVEDGTDAVIETIKERSCSKASCYWGFKQENWHDSCIQKCVISGKICAVVLSITSELAAKICSDSPPADYVNNDQHSLPKAHMEKLSKFCIYLLDKVITDNDFAWEDIMSLRFYVPASHQMSVELLQPMFSNAPSELSEMSQKKIKNGEEPIFNIVPVIGAGRSASSMDDVVTCELLARKY* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02530 740 Gene3D HUPs 1 157 IPR014729 -
Rops8g02530 740 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
Rops8g02530 740 CDD eu_AANH_C_2 435 559 - -
Rops8g02530 740 Pfam Diphthamide synthase 1 230 IPR002761 -
Rops8g02530 740 Pfam Endoribonuclease L-PSP 428 556 IPR006175 -
Rops8g02530 740 FunFam diphthine--ammonia ligase 1 158 - -
Rops8g02530 740 Gene3D - 411 561 IPR035959 -
Rops8g02530 740 NCBIfam diphthine--ammonia ligase 1 231 IPR002761 -
Rops8g02530 740 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
Rops8g02530 740 SUPERFAMILY YjgF-like 417 564 IPR035959 -
Rops8g02530 740 Gene3D - 307 410 IPR035959 -
Rops8g02530 740 FunFam Endoribonuclease 412 560 - -
Rops8g02530 740 SUPERFAMILY YjgF-like 326 397 IPR035959 -
Rops8g02530 740 FunFam Diphthine--ammonia ligase 159 255 - -
Rops8g02530 740 FunFam Endoribonuclease 292 411 - -
Rops8g02530 740 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 737 IPR030662 -
Rops8g02530 740 Gene3D - 160 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02530 K06927 - gmx:100807009 1268.83