Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02518 ATGGAGGAACAAACAAAATCACGCCGAGAACGAAGGAAAGAGTCTCGCGTGGCAAAGAATGCTTCAAAACACCAATCCTGGCTCCACCACCAGAAATCTCGAGGTATGAAAAGAAGTAACCATAATTCAGAGTTAGAAAATAAAAGCAAATTGGACCAACCAGTTAGTCTTGGTCTCAATGAAACACAAGTTGTGAAGTTGGAATCTGGGAAACATGAGACAGCTGAAGAATGCACCGTTTCAGAGGAAATTCGTGGCTCTGTTGCAAAGAAAATGAGCAAGGGCTTTCATAAAAGTTCAAAGAAGAAGAGGGTTGAGATGGGTGTGACGGAAGTTTCAATAGCTACCAAGCAGGATCTAGAATTGGAAAGAAAACTTGCCAAGAAGCTCAAGGTGAAGGAAGGAAAATTGAGGGGAATGGATGATGGGCTGAATGTGATACTTGAAGGAATGTCATCAGCTATTGATTTTATTGGAGACGGTGAGGTTCCTGGTTCATGTGAATTACCCACAAAGAGGCTGAAGAAGATTTCGTCGAGTAAGAAGGATAAGCTGTCCAAGAGACGGATGGAAGCAGAGCCGTTAGATGGTGTATCAGGGCCTTTAGAAACTTCTGATCAAGGTGTAGCATCAGAAGAAGATCCTGACAGTGTACCTTCAAGGAAGAAACATAAGAAAAGAAAATTGTCGGATCAACAGCAGGAGGATAACATGGAGGATGATGACGTGGAATCCCGTGGAACGGGGGTGACATCAGGGGATGTTCCTGCTAAAGTTCCAGTGAAGAAAGCAAAAGAAAAATATATAGCACCTCACTTGAGAGCTCGTGCTGGCAATGAACCTGAAGAGTATACTCAAATTCGAAGACGTGTACGAGGCCTTCTTAACAGGCTCTCTGAATCTAATGTCGAGTCAATTACTGGAGAATTGTCCATGATCTTTCAGTCTGTTGCTCGTGGTGTTGCTTCACAGATTATGATCGGGGAGACTTTAGCATCATGTTCTGGTGGCCCCCGTGGCAATGAACAGTATGCTGCTGTGTTTGCTGCATTTGTTGCAGGGATGGCCTGTTTGGTTGGTATTGACTTCAGTGCGAAGTTTATGGCTTCCTTTGCCAAATGCTTTGAGGATGAGTACCTTAAAGAAGACAACCTCTCCTTGCGGAATCTCACTCTTCTCTTATCCTATTTATGCATATTTGGAGTCTGTTCTTGTGATTTAATATATGACTTTATAGTCATGCTGAGCAAGCGTTTGACTGAGATAGATGTCTCTATCATTTTGGCAGTGTTACAATGTTGTGGGATGAAAATAAGGGCTGATGATCCAGCTGCCATGAAAATTTTCATTCTTAGTGTTCAGAGTACGACAAATAAGTTGAAGGCTTCGTCTGGAGATGACCATGAAAAGAAACACAGTAAAAGAATGGAGTTCATGCTTGAAACCATATGTGACATCAAGAACAATAAGAGCAGGCCAAAAGAGGACCCTGCACATCACACTCGAATTAAAAAGTGGTTACAGAAGTTAAGAGTTGATGACATTTTGATTAGAGGGCTTAAATGGAGCAATTTACTTGATCCTGACAAGAAGGGCCAATGGTGGTTGTTGGGAGATGTGGTTTCTGCAACAGATAATGTCGAAGAAGTTGCTAACAAAATAGACAAAGATGTTCTTGAAACCCAACGAATGCTGCAGCTTGCTGCTGCTCAAAAGATGAACACAGATGCCAGAAGGGCAATCTTTTGTATTATAATGAGTGGGGAGGACTATCTTGATGCATTTGAGAAGCTTCTGAGATTGGAATTACCAGGCAAGCAGGACAGAGATATAATGCGGGTTCTAGTTGAGTGTTGCTTGCAGGAGAAAGTTTTTAACAAGTATTATGCAGTGCTGGCTTCCAAGTTGTGTGAACATGACAAAAATCACAAGTTCACTCTACAGTTTTGCCTGTGGGACCACTTTAAGGAGCTGGAGTCAATGCCACTGATGAGGTCAATGCACCTGGCAAAGTTCGTGGCTGAAATGGTTGCCTCTTTCACTCTCTCCCTTGCAGTTATGAAGACTGTGGATCTCAGTGATATCAACCAGTTAACACCAAAAAGGATCATGCATTTCCGCATTCTGTTTGAGGCCATTTTTGAGCATCCTGAAAACTTGGTGTGGAATATATTCACACGTACAGCAGTGACTCCTGAACTTGAAAGTCTTCGACAAGGCATTGTGTTTTTCATTAAGGAGTACATTGTGAACAACAATGAAGCTCTAACTCAAAAATTTAAGTTGGCAAAAAGAGCTCTTAATAATGTGGAAGGAATTCTGATGTGA 2328 0.4201 MEEQTKSRRERRKESRVAKNASKHQSWLHHQKSRGMKRSNHNSELENKSKLDQPVSLGLNETQVVKLESGKHETAEECTVSEEIRGSVAKKMSKGFHKSSKKKRVEMGVTEVSIATKQDLELERKLAKKLKVKEGKLRGMDDGLNVILEGMSSAIDFIGDGEVPGSCELPTKRLKKISSSKKDKLSKRRMEAEPLDGVSGPLETSDQGVASEEDPDSVPSRKKHKKRKLSDQQQEDNMEDDDVESRGTGVTSGDVPAKVPVKKAKEKYIAPHLRARAGNEPEEYTQIRRRVRGLLNRLSESNVESITGELSMIFQSVARGVASQIMIGETLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKFMASFAKCFEDEYLKEDNLSLRNLTLLLSYLCIFGVCSCDLIYDFIVMLSKRLTEIDVSIILAVLQCCGMKIRADDPAAMKIFILSVQSTTNKLKASSGDDHEKKHSKRMEFMLETICDIKNNKSRPKEDPAHHTRIKKWLQKLRVDDILIRGLKWSNLLDPDKKGQWWLLGDVVSATDNVEEVANKIDKDVLETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYAVLASKLCEHDKNHKFTLQFCLWDHFKELESMPLMRSMHLAKFVAEMVASFTLSLAVMKTVDLSDINQLTPKRIMHFRILFEAIFEHPENLVWNIFTRTAVTPELESLRQGIVFFIKEYIVNNNEALTQKFKLAKRALNNVEGILM* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02518 775 MobiDBLite consensus disorder prediction 159 256 - -
Rops8g02518 775 SUPERFAMILY ARM repeat 281 491 IPR016024 -
Rops8g02518 775 MobiDBLite consensus disorder prediction 1 20 - -
Rops8g02518 775 Pfam MIF4G domain 289 490 IPR003890 GO:0003723|GO:0005515
Rops8g02518 775 ProSiteProfiles MI domain profile. 576 692 IPR003891 -
Rops8g02518 775 Gene3D - 257 535 - -
Rops8g02518 775 SMART ma3_7 577 683 IPR003891 -
Rops8g02518 775 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 3 770 - -
Rops8g02518 775 MobiDBLite consensus disorder prediction 1 57 - -
Rops8g02518 775 FunFam MIF4G domain-containing protein / MA3 domain-containing protein 255 536 - -
Rops8g02518 775 SMART if4_15 288 490 IPR003890 GO:0003723|GO:0005515
Rops8g02518 775 Pfam MA3 domain 578 679 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02518 Rops-Chr8 57679855 57688270 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02518 K17583 - gmx:100780608 1147.11