Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02516 ATGGCAACTGATCACGTAGTGGGAGATGACAAGGGATGGACTCTCGATTTTAACTACACTCAGTGGGCTCAGGACAAAGTTTTCCGTGTTGGTGACAAGCTTGTGTTCAACTACGACAAAACGAAGCACAATGTGGTGAAAGTGAATGGGACACTATTCCAGAACTGCAGCTTCACACCAGCAAATGAAGCACTGTCAACAGGAAACGACGGCATTGCACTGGAGAAGGAAGGGAAGAAGTGGTACATTTGTGGGAAGGCCAACCACTGCTCTGATCATCAAATGAAGTTTGTCATCAATGTCCAATCCGAAGGTGCACCTGCTCCTTCTACTGCTCCCTCTACCCTATCATCCCTCTCTGGGGCCCTCTTGGCTGCCATGGTCGCCATTGCAGCCATCTTTGCTTGA 408 0.4902 MATDHVVGDDKGWTLDFNYTQWAQDKVFRVGDKLVFNYDKTKHNVVKVNGTLFQNCSFTPANEALSTGNDGIALEKEGKKWYICGKANHCSDHQMKFVINVQSEGAPAPSTAPSTLSSLSGALLAAMVAIAAIFA* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02516 135 Gene3D - 1 106 IPR008972 -
Rops8g02516 135 ProSiteProfiles Phytocyanin domain profile. 3 103 IPR003245 GO:0009055
Rops8g02516 135 SUPERFAMILY Cupredoxins 1 102 IPR008972 -
Rops8g02516 135 CDD Phytocyanin 3 101 - -
Rops8g02516 135 FunFam Cupredoxin superfamily protein 1 106 - -
Rops8g02516 135 Pfam Plastocyanin-like domain 13 92 IPR003245 GO:0009055
Rops8g02516 135 PANTHER BLUE COPPER PROTEIN 3 110 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02516 Rops-Chr8 57662736 57663931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02516 1 114 Miscellaneous Gene Families AT2G32300 37.815 2.28e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02516 - - lja:Lj0g3v0169829.1 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02516 8 57662736 57663931 Rops8g02516 8 57662736 57663931 ECH