Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02514 ATGGAAAACAAGCATGCACATAATCGGACTTATGAGGATTTTGATCCTTTGTTTAAATGGCGTAGAGAAGAGGGACGTGACACCATTGAACTTCATCTTCCAGGTTTTAGGAGAGAGCAAATACGAATTCAGATCAACCATCTTGATGTTTTGGTAATAAGTGGAGAGCGTCCATTGGATGGAACTAGATGGAGACGTTTCAAGAAAGAATTTGAAATCCCAAAATATTGCAATGCAGATGCTATTCATGGCAATTTCATGCAGAACATTCTTTCTGTGGTAATGCCAAAGAAAACTTCTCTAATTCCTCAAGAGGAGCAAGAAAGACAAATCCCAAAATTTGAACATGAGAAAGAGAAGGAGAAAGAGAAAAGGAAAAAGAAAAGGACATATGAGAGTGTGCAATTTGAAGGCCGGGGCAATGAAGAAAAGACTGAAACAGCAACCAAAGAGGAACTTCTACAAGAAGATACTTACACAATGAACAACCAGTTTGAAGAAAATGATGAAGTGGGGTTAACACCTGAAACAACTAGAGAGGTTGCCCTCAAATTCATGGTTGTGATGATTGTGATATTGGTTATAGCAAGTTACCTCGCAGACTTGAGCAAAAGCCTCATGGCTGAAGCTCAATCATATTTTCTGTAA 648 0.3858 MENKHAHNRTYEDFDPLFKWRREEGRDTIELHLPGFRREQIRIQINHLDVLVISGERPLDGTRWRRFKKEFEIPKYCNADAIHGNFMQNILSVVMPKKTSLIPQEEQERQIPKFEHEKEKEKEKRKKKRTYESVQFEGRGNEEKTETATKEELLQEDTYTMNNQFEENDEVGLTPETTREVALKFMVVMIVILVIASYLADLSKSLMAEAQSYFL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02514 215 Pfam Hsp20/alpha crystallin family 21 111 IPR002068 -
Rops8g02514 215 SUPERFAMILY HSP20-like chaperones 8 103 IPR008978 -
Rops8g02514 215 CDD ACD_sHsps-like 28 97 - -
Rops8g02514 215 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 9 112 IPR002068 -
Rops8g02514 215 MobiDBLite consensus disorder prediction 102 129 - -
Rops8g02514 215 Coils Coil 104 124 - -
Rops8g02514 215 MobiDBLite consensus disorder prediction 101 129 - -
Rops8g02514 215 PANTHER HEAT SHOCK PROTEIN 26 4 153 - -
Rops8g02514 215 Gene3D - 2 134 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02514 Rops-Chr8 57636783 57638135 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02514 - - gmx:100527560 238.424