Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02512 ATGCAGACTAGGACGGTTCAAGTGAAGCAGGTTTCAGATCTAGCTGGTGAGAGAGAGATTCACGAGTTCTTCTCGTTTTCTGGAGAAATCGAACATATTGAGATCCTGAGTGAAAATGGGAAATCAAAGACTGCATTTGTGACATTTAAAGATCCCAAAGCGCTTGAAATTGCATTGTTGTTATCGGGAGCAACAATAGTAGACCAGATTGTGAATATAACTCCAGCTGAGAACTATGTACCAAATCGTGAGATGCAGGAAGTAAGGGTCGTTGAAAATGCTATAAATGTTGTTCCTTCTGAAAGTGTCTCTTTGAATATTGAGGAGGAGAAACCCAACTCTACTAATGGAAGAATGTATATTAATAGAGCTCAAGTTGCAGTCACAAGTATGCTGGCAAAAGGTTCAGCAATAAGGCAAGATGCTGTGAACAAAGCTAAAGCATTTGATGAAAAGCACCAGTTGACTGCTAATGCATCTGCAAAGGTCGTTTCTTTTGACAAGAGAGTTGGACTGACAGAGAAATTGACAGTTGGACTTTCTGTAGTCAATGAGAAAGTGAAGTCTGTGGATCAAAGGCTTCATGTTTCAGATAAAACAATGGCAGCAATATTTGCAGCTGAGAGGAAGTTGAATGATACAGGATCAGCTGTCAAAACAAGCAGATATGTAACTGCTGGAACAGCATGGTTAAATGGTGCTTTTAGCAAGATGACAAAGGCCGGACATGTTGCTAGCACTAAAACTAGAGAAAAGTTTCATATGGCTGTTTCAAACTTGACAGCAAAGGAACCACCAGTAGCTGCATAG 810 0.4025 MQTRTVQVKQVSDLAGEREIHEFFSFSGEIEHIEILSENGKSKTAFVTFKDPKALEIALLLSGATIVDQIVNITPAENYVPNREMQEVRVVENAINVVPSESVSLNIEEEKPNSTNGRMYINRAQVAVTSMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVVSFDKRVGLTEKLTVGLSVVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKMTKAGHVASTKTREKFHMAVSNLTAKEPPVAA* 270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02512 269 CDD RRM_Vip1_like 6 74 IPR034360 -
Rops8g02512 269 SUPERFAMILY RNA-binding domain, RBD 2 85 IPR035979 GO:0003676
Rops8g02512 269 SMART rrm1_1 5 74 IPR000504 GO:0003723
Rops8g02512 269 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 255 - -
Rops8g02512 269 Gene3D - 1 88 IPR012677 -
Rops8g02512 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Rops8g02512 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops8g02512 Rops-Chr8 57598605 57602808 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02512 - - gmx:100779011 444.891