Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02511 ATGGAAGTAGCTGTTTCTCCACAAGCACAAAAGCAGAATTTGCAGGCAACAGGTCGCAAAATTTCATGCACTGGATCCCAGAAAGATCTGTGGCTTGTTGTGCGAGAAGGATCTCTGAATGATGTAGAGTTGGCCTTGGCATTTTTGAAAAAGAGTGGGGGCAATATTAATTTGAGGAACACCTTCGGGCTGACTCCTCTTCATATTGCAACTTGGAGAAACCACATTCCCATTGTAAGGAGGCTTCTTGCTGCTGGTGCAGATCCTGATGCCCGAGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCTCTGCATTTTGGTCATGTTGCTGTGGCAAGCATCCTTCTTCAGCATGGTGCCTCTATTACATTGGAGGACTCTAAATCTCGAATACCTGTAGATCTCTTATCTGGCCCCGTGTTTCAGGTTTTTGGAAATGAACACAGTTCAGTGGCTACTGAGGTCTTTAGTTGGGGCAGTGGTGCAAATTATCAGCTTGGAACTGGAAATGCGCATATTCAGAAGCTACCATGCAAAGTTGATTCACTTAGTGGTTTGTTCATAAAGCTGATTTCTGCGGCGAAGTTCCATAGTGTGGCACTTACTGCTCATGGAGAAGTGTATACTTGGGGATTCGGAAGGGGGGGACGTCTAGGGCATTCTGAATTTGACATACACAGTGGTCAAGCTGCTGTCATCACTCCCCGCCAGGTGACTTCTGGTCTGGGTTCCCGCAGAGTGATGGCAATTGCTGCAGCTAAGCATCATACAGTTATTGCCACTCAGGGTGGGGAAGTATTCACTTGGGGATCCAATAGAGAGGGACAACTTGGGTACACTTCTGTTGATACGCAACCCACACCTCGCAAAGTATCTGCTTTGAGGTCAAAAATTGTTGCTGTTGCTGCAGCAAATAAGCACACAGCTGTAGTTTCTGATTTAGGTGAAGTTTTTACTTGGGGTTGCAATAGAGAGGGTCAGCTTGGTTATGGCACCTCAAACTCAGCATCTAATTACACCCCACGTGTGGTTGAATCCTTGAAGGGAAAGACTTTAATCAAAGTTTCTGCTGCAAAATATCATACAATTGTATTAGGATCTGATGGAGAGGTATACACCTGGGGTCATCGACTTGTTACTCCAAAACGTGTAGTGATTACTCGGAACTTAAAGAAAAATGGAAACACCCCTTTAAAGTTTCATCGCAAGGAACGACTTCAAGTGGTTTCTATAGCTGCTGGAATGGTACACAGCATGGCTCTTACAGATGATGGTGCATTATTTTATTGGGTCTCCTCAGATTCTGATCTTAGAAACCAGCAGTTATATGCTATGTGCGGAAGAAATATAGTGAGCATATCTGCTGGAAAGTACTGGACTGCAGCAGTTACAGCGACAGGTGATGTTTACATGTGGGATGGGAAGAAAGGTAAGGATAAGCCACCTGTTGCAACTCGGTTGCATGGTGTAAAGAAGGCTACTTCAGTTTCAGTTGGTGAAACACATTTACTAATTGTGGCTTCCATCTATCATCCTGTCTACCCTCCCAACATGGTCGAGAATTCTCAGCTCAAGTCGAATAACAGGGATGATATGGAAGAGTTAAATGAAGACATTTTATTTGAGGATATGGATTCCAATAATATGATATCTACGGTACAAAATAATACTTTTAGGCAGAGATCTATACCCAGCTTGAAAAGTCTTTGTGAAAAAGTAGCAGCAGAGTGTCTAGTGGAGCCACGGAATGCCATACAACTGCTTGAGATTGCCGATTCTCTGGGAGCAGATGATTTGAATAAATATTGTGAGGATATTGTCATGCGAAACCTTGATTATATATTTACAGTTTCATCACAAGCTGTAGCAAGTGCCTCACCAGATATTTTGGCTAACCTTGAGAGGTCATTAGACCAGAGATCATCCGAGCCATGGAGTCACCGTCGGCTCCCTACTCTGATGGCTACACTTCCTGTCATCATTAACAGTGAAGAGGATGATAGCGAAACAGAGTTTCAAAGGACTCATGACAAACCCATGAAAATGTCGGCACTGAAATTGGAGCAAGTTGAAAGACTTGATTCCTTTCTACAGCCCAAGGATGATCCCAATAATGAAATCTCCAAAGTAGTTCGAGCTATAAGGAAGAAGTTACAGCAGATTGAGATGCTTGAAGCTAAGCAGTCTAAGGGACATCTTCTTGATGACCAACAAATCGCAAAGCTTAATTCTAAGTCAGCACTTCAGAGCTCACTTGCAGAGCTAGGTGTTCCTGTTGAGACTTCACAGAATAGAGACTCATCATCTATACTACCAGAAGGGAAAGGTAGTAAGAAAGATAAATTATCAAAAAAACAAAGGAGAAAGAGTGGCAAATCAAACATAGAGCAGACAGAAATAGAATCTGTTTATTCTAATAGTGAAGTAATCCCCAAATCTGAAGATTTGTTGGACATTGCCATTATGACAATTCCTAATTCGAAGGTGGAAGAGGATGCCATTTGCGAACATACCACTGCAGAGCAGGGAACACAAGATTTAGCTTTTGTTGTTCAGAAGAAAGATGCTTTAGAGTTGCTGAAAAATAAGGGTCAGTCACCAAAGGTTTCTAAGAAGAAGAGCAAGAAGGGTGGGCTTTCTATGTTTCTGAGTGGTGCTCTTGATGAAGCCCCAAAAGAGGTCGCTCCCCCTCCACCACCGACACCAAAAAATGATGTTCCTGCATGGGGTGGGGCCAAGTTTATGAAGGGTTCTGCTTCTCTTCGTGAAATCCAGGATGAACAAAGCAAAATTAAGGGAAACAAGCCAGCTGTGGGTAAAGATAAGGTGGAAGATCTTCCTGATTTTGGCAGTGGGGGAAAAATAAAGTTGAGTTCATTTCTTCCTTCTAGCCCAATACCTGTTGCCTCAACTCGCAGTTCACAGGTATCTGATGGAGAAATAAGCACCCCTCCTTGGGCTGCTTCAGGAACCCCTCCTCAACTCTCTAGGCCATCTTTAAGGGACATCCAAATGCAACAGGTAAAAAAGCAAAGCTTTTCCAATAGTCCAAAGACTAAAGCAGCTGGATTCACTATTGCTACTGGTCAAGGCTCCCCATCTGAAGCAACTGGGGTGAACCGCTGGTTCAAGCCTGAAGTGGAAACACCATCTTCAATTCGTTCTATTCAAATTGAGGAAAAGGCTATGAAAGATCTTAAGCGCTTCTATAGCAGTGTCAAGATAGCTAGAAAGCAATCTTAA 3246 0.4331 MEVAVSPQAQKQNLQATGRKISCTGSQKDLWLVVREGSLNDVELALAFLKKSGGNINLRNTFGLTPLHIATWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHVAVASILLQHGASITLEDSKSRIPVDLLSGPVFQVFGNEHSSVATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLSGLFIKLISAAKFHSVALTAHGEVYTWGFGRGGRLGHSEFDIHSGQAAVITPRQVTSGLGSRRVMAIAAAKHHTVIATQGGEVFTWGSNREGQLGYTSVDTQPTPRKVSALRSKIVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKTLIKVSAAKYHTIVLGSDGEVYTWGHRLVTPKRVVITRNLKKNGNTPLKFHRKERLQVVSIAAGMVHSMALTDDGALFYWVSSDSDLRNQQLYAMCGRNIVSISAGKYWTAAVTATGDVYMWDGKKGKDKPPVATRLHGVKKATSVSVGETHLLIVASIYHPVYPPNMVENSQLKSNNRDDMEELNEDILFEDMDSNNMISTVQNNTFRQRSIPSLKSLCEKVAAECLVEPRNAIQLLEIADSLGADDLNKYCEDIVMRNLDYIFTVSSQAVASASPDILANLERSLDQRSSEPWSHRRLPTLMATLPVIINSEEDDSETEFQRTHDKPMKMSALKLEQVERLDSFLQPKDDPNNEISKVVRAIRKKLQQIEMLEAKQSKGHLLDDQQIAKLNSKSALQSSLAELGVPVETSQNRDSSSILPEGKGSKKDKLSKKQRRKSGKSNIEQTEIESVYSNSEVIPKSEDLLDIAIMTIPNSKVEEDAICEHTTAEQGTQDLAFVVQKKDALELLKNKGQSPKVSKKKSKKGGLSMFLSGALDEAPKEVAPPPPPTPKNDVPAWGGAKFMKGSASLREIQDEQSKIKGNKPAVGKDKVEDLPDFGSGGKIKLSSFLPSSPIPVASTRSSQVSDGEISTPPWAASGTPPQLSRPSLRDIQMQQVKKQSFSNSPKTKAAGFTIATGQGSPSEATGVNRWFKPEVETPSSIRSIQIEEKAMKDLKRFYSSVKIARKQS* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02511 1081 MobiDBLite consensus disorder prediction 964 1038 - -
Rops8g02511 1081 PANTHER BTK-BINDING PROTEIN-RELATED 19 1072 - -
Rops8g02511 1081 SUPERFAMILY RCC1/BLIP-II 406 507 IPR009091 -
Rops8g02511 1081 Gene3D - 23 140 IPR036770 -
Rops8g02511 1081 Coils Coil 708 728 - -
Rops8g02511 1081 Gene3D - 406 538 IPR009091 -
Rops8g02511 1081 ProSiteProfiles Ankyrin repeat region circular profile. 62 93 - -
Rops8g02511 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 154 205 IPR000408 -
Rops8g02511 1081 ProSiteProfiles Ankyrin repeat profile. 62 94 IPR002110 GO:0005515
Rops8g02511 1081 MobiDBLite consensus disorder prediction 759 797 - -
Rops8g02511 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 316 369 IPR000408 -
Rops8g02511 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 206 264 IPR000408 -
Rops8g02511 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 265 315 IPR000408 -
Rops8g02511 1081 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 370 425 IPR000408 -
Rops8g02511 1081 SUPERFAMILY Ankyrin repeat 32 136 IPR036770 -
Rops8g02511 1081 MobiDBLite consensus disorder prediction 961 1039 - -
Rops8g02511 1081 Pfam Ankyrin repeats (3 copies) 43 127 IPR002110 GO:0005515
Rops8g02511 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 265 312 IPR000408 -
Rops8g02511 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 206 260 IPR000408 -
Rops8g02511 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 316 366 IPR000408 -
Rops8g02511 1081 Pfam Regulator of chromosome condensation (RCC1) repeat 155 202 IPR000408 -
Rops8g02511 1081 MobiDBLite consensus disorder prediction 924 947 - -
Rops8g02511 1081 MobiDBLite consensus disorder prediction 864 947 - -
Rops8g02511 1081 PRINTS Chromosome condensation regulator RCC1 signature 318 332 IPR000408 -
Rops8g02511 1081 PRINTS Chromosome condensation regulator RCC1 signature 189 202 IPR000408 -
Rops8g02511 1081 PRINTS Chromosome condensation regulator RCC1 signature 208 224 IPR000408 -
Rops8g02511 1081 PRINTS Chromosome condensation regulator RCC1 signature 155 171 IPR000408 -
Rops8g02511 1081 PRINTS Chromosome condensation regulator RCC1 signature 265 281 IPR000408 -
Rops8g02511 1081 PRINTS Chromosome condensation regulator RCC1 signature 415 433 IPR000408 -
Rops8g02511 1081 PRINTS Chromosome condensation regulator RCC1 signature 302 318 IPR000408 -
Rops8g02511 1081 SUPERFAMILY RCC1/BLIP-II 118 431 IPR009091 -
Rops8g02511 1081 ProSiteProfiles Ankyrin repeat profile. 96 128 IPR002110 GO:0005515
Rops8g02511 1081 Gene3D - 141 394 IPR009091 -
Rops8g02511 1081 ProSiteProfiles Ankyrin repeat region circular profile. 96 127 - -
Rops8g02511 1081 SMART ANK_2a 96 125 IPR002110 GO:0005515
Rops8g02511 1081 SMART ANK_2a 25 58 IPR002110 GO:0005515
Rops8g02511 1081 SMART ANK_2a 62 91 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02511 Rops-Chr8 57572761 57582612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02511 35 136 Acyl Lipid Metabolism Gene Families AT5G53470 33.333 4.15e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02511 K24810 - gmx:100800604 1826.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02511 8 57572761 57582612 Rops8g02511 8 57572761 57582612 ECH