Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02502 ATGGCGGCGAACGATCCAACCCAGAACCAAGTGGCTCTGATCCTTGGCCCCGATTCAACCCATCTTGAATCCCTAATCTCAAACCTAATGTCCTCTTGGAACGAGCAACGTTCCCAGGCTGAGACGTTGTTCAACGTGTGCAAACAAACCCACCCTGACACCCTAATCCTCAAACTCACCCAACTCGTCCACTCTTCCCCTAATCCCGAAACACGAACCATGTCCACCATCCTCCTCCGCCGCCACCTCACCCGCCACCACGACTCCTTCCTCTGGCCCCACCTCTCCCCTTCCACACGCTCCACCCTCCGTTCTCTCCTCCTCTCTTCTCTTCACCAAGAGCCCATCAAATCCATCTCCAAGAAGCTATGCGACACCGTTTCCGAACTCGCCTCCGCAATCCTACCTGAAGACCCCGCCGCCTGGCCGGAACTCCTCCCTCTACTCTTCCAGTGGGTCACGTCACCAGACCCTAGGTTACAGGAAATTTCTCTTCTCATTTTTGCTCAATTGGCTCATTACATAGGTGAAACCCTACTTCCTCAATTGTCCACCCTTCACTCCGTCTTCCTCCGCTGCCTCTCCGCCTCCACCTCCTCCGACGTCCGTCTCGCCGCCCTTGCCGCGAGTATTAACTTCGTTCAGTGCCTCTCCAGTTCCTCCGACCGTGACAGGTTCCAGGATTTGCTGCCCCTTATGATGCAGACTTTGACTGAGGCGCTGAATTCCGGGCAGGAGGCAACTGCTCAGGAGGCTCTTGAGCTTCTCATTGAGCTTGCTGGGACGGAGCCGCGGTTCCTACGAAGGCAGATTGTGGATGTTGTTGGCTCCATGCTGCAGGTTGCTGAGGCTGAGTCACTGGAAGAAGGGACGCGACATTTGGCTATTGAGTTTGTTGTGACACTTGCAGAGGCGAGGGAGCGTGCTCCCGGGATGATGAGGAAGTTGCCGCAGTTTGTGAGGAAGTTGTTCGGTGTGCTGATGAATTTGTTGCTTGATATAGAGGATGATCCGGCATGGCATGGTGCTGAGACCGAGGATGAGGATGCTGGTGAGACTAGTAACTATGGATTTGGACAGGAGTGTTTGGATAGGCTTTCCATTTCTCTTGGTGGGAACACCATAGTGCCGGTCGCTTCTGAGTTGTTGCCGACTTACTTGGCTGCTCCTGAATGGCAAAAGCATCATGCTGTGCTCATTGCACTTGCACAGATTGCAGAGGGTTGTTCAAAGGTGATGATAAAGAATCTAGAGCAGGTATTGTCAATGATTTTAAATTCATTTAGCGATCCCCACCCCCGAGTGAGGTGGGCAGCTATAAATGCAATTGGGCAATTGTCCACAGATTTGGGGCCAGACTTGCAGGTTAAATACCACCACTTAGTGCTGCCGGCATTAGCTGGAGCAATGGATGATTTTCAAAATCCCCGAGTACAGGCTCATGCTGCTTCTGCGGTCCTAAATTTCACTGAGAATTGCACCCCAGAAATCCTAACACCTTATTTAGATGGGATTGTGAGCAAACTTCTTGTACTCCTGCAGAATGGCAAGCAAATGGTTCAAGAAGGTGCTTTGACAGCTTTAGCATCAGTTGCCGATTCTTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTTTGATGAATGCAAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCAGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCGCTGCAACAATCTCAACTGGACGCAGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTTATGCCTCCCTTGCTCCAGTCTGCACAACTTAAACCTGATGTGACTATTACATCAGCAGATTCTGATACTGAATTTGATGAAGATGATGACAGCATTGAAACAATCACTCTTGGGGATAAAAGGATAGGCATTAAGACCAGTGTCTTGGAGGAGAAGGCTACAGCTTGTAACATGCTATGTTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAAGCAGCAGTTTCAGCTATGCCAGAGCTGTTGTCCTCTGCTAAATCAGCTGTGGAGAAGGGACAAGCACAAGGTCGTGATGAGACTTACATAAAACAGTTGTCTGATTATATAATACCAAATTTGGTGGAAGCTTTACACAAGGAGCCTGAGGTAGAAATTTGTGCAAGCATGTTGGATGCGTTGAATGAATGCATACAGGTCTCTGGACCACATCTAGATGAAAAGCAAGTGAGGAGCATTGTTGATGAGATTAAACAAGTCATCACTGCCAGTTCATCTAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTCGATGCTGAAGAAAGAGAACTACTAAAGGAAGAAAATGAGCAAGAAGAAGAACTTTTTGATCAAATTGGAGATTGCTTGGGGACTTTGATAAAAACATTCAGGGCATCTTTTTTGCCTTTCTTTAATGAGCTTTCGTCATACCTGACACCTATGTTTGGTAAAGATAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACTGTCGTGAAGCAGCTCTTAAATATTATGATTCATACCTTCCATTCTTGCTTGAAGCTTGCAATGATGAATGTTCAGATGTTCGACAGGCTGCTGTTTATGGGGTCGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGGTTAAATGCTGTCATAACGCATCCAAATGCACTACATTCTGATAATGTAATGGCATATGACAATGCTGTTTCAGCTCTTGGTAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAGCACAGGTTGTTCCTGCATGGCTAAGTTGCTTGCCTATAAAAGGTGATTTAATTGAGGCTAAGGTTGTGCACGACCAACTCTGTTCAATGGTTGAAAGATCAGATAGAGAACTTTTAGGTCATAACAATCAATATCTTTCCAAAATCGTTGCAGTTTTTGCTGAGATTTTATGTGCGGGAAATGATCTGGCAACTGAACAAACTGTCAGTAGGATAATTAATTTATTGCGGCAGCTCCAACAGACTCTGCCGCCTTCTACCCTTGCTTCAACCTGGTCATCCTTGCAGCCTCAGCAGCAGCTTGCACTTCAGTCCATCCTATCATCCTAG 3351 0.4643 MAANDPTQNQVALILGPDSTHLESLISNLMSSWNEQRSQAETLFNVCKQTHPDTLILKLTQLVHSSPNPETRTMSTILLRRHLTRHHDSFLWPHLSPSTRSTLRSLLLSSLHQEPIKSISKKLCDTVSELASAILPEDPAAWPELLPLLFQWVTSPDPRLQEISLLIFAQLAHYIGETLLPQLSTLHSVFLRCLSASTSSDVRLAALAASINFVQCLSSSSDRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQIVDVVGSMLQVAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVLMNLLLDIEDDPAWHGAETEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLAAPEWQKHHAVLIALAQIAEGCSKVMIKNLEQVLSMILNSFSDPHPRVRWAAINAIGQLSTDLGPDLQVKYHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPEILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQAQGRDETYIKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLDEKQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEERELLKEENEQEEELFDQIGDCLGTLIKTFRASFLPFFNELSSYLTPMFGKDKTSEERRIAICIFDDVAEHCREAALKYYDSYLPFLLEACNDECSDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLNAVITHPNALHSDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELLGHNNQYLSKIVAVFAEILCAGNDLATEQTVSRIINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02502 1116 PANTHER IMPORTIN BETA 26 1088 IPR040122 GO:0006606
Rops8g02502 1116 Pfam Importin repeat 6 785 888 IPR041389 -
Rops8g02502 1116 Pfam HEAT repeats 386 485 - -
Rops8g02502 1116 Pfam Importin repeat 286 377 IPR041653 -
Rops8g02502 1116 Coils Coil 831 855 - -
Rops8g02502 1116 Gene3D - 18 1115 IPR011989 -
Rops8g02502 1116 Pfam HEAT repeat 925 952 IPR000357 GO:0005515
Rops8g02502 1116 SMART TOG_3 369 610 IPR034085 -
Rops8g02502 1116 SUPERFAMILY ARM repeat 21 955 IPR016024 -
Rops8g02502 1116 ProSiteProfiles Importin-beta N-terminal domain profile. 40 113 IPR001494 GO:0006886|GO:0031267
Rops8g02502 1116 Pfam Interferon-related developmental regulator (IFRD) 489 625 IPR007701 -
Rops8g02502 1116 ProSiteProfiles HEAT repeat profile. 420 458 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02502 Rops-Chr8 57434022 57446925 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02502 K20222 - gmx:100797431 1944.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02502 8 57434022 57446925 Rops8g02502 8 57434022 57446925 ECH