Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02493 ATGCAATCGCACCTTCTGGTGGGACCCATCTTTATAGCACCATATGGTAGCTCCAATCCTTTCCTCTCCGCCGCGCCGCCTACCCTTCATCGCCGCCGACTAATCACAGCCTCCTCCTCTTCCTCTTCCGCCGCGGCAATCAACGGCGGCCGCAGCCACTACGCCGTGCTCGGCGTCGCCCGAACCGCCAGCGCCGTCGACATCAAACGTGCTTATCGCCTCCTCGCTCGCAAGTATCATCCTGATGTTAGCAAGGATCCTTGTGCTGCTGAGTTGTTCAAGAGCATCCGTCATGCATATGAAGTACTTTCCAATCAAGCAACGAGAATTCAGTATGATCAGGAACTTCAATTTGGTCACAAGCCTTACAGGGATAAATGGAGTTATAGCACTGAATTTGAAGATCAGCCAAGAACCTCTAGGTGGGCCAACCTGAGGAAGAAAATGCATGATGAAAGATATTGGGAGCATTACGATGTCAATGAGGGCTACTACAGCAGTGAAACAGATGAGGAGGAAGATGAAGGAAATTTAGATGAAGAGAGGGGTTCCTTTTTTGAAGTGCTTAGATCAGCATTCATGTTACTATTATTGTTACAGACATTAGGATCCCGACTCTCCCTTACATTTAGCAGTCTGACAGCATTGTTTGATAAGAAATTAGACACCGGCTATAAATTTGGTTATGTAATAGCATGGATTTTGGGCGGGAGGGGTGGCATATTGCTAACGTTGTGCTTGTCATTTACAAGTTGGGTTTGCGGGAAAACCAGTAGCAGTGTTGTTACACTAGTGATGGTAGCCATGTGGGTTGGCTCTTACCTTGCAAGGTACGCACCACTTCCCCAAGGTGCTTTGTTAACGCTTCTCTACATGTCTATTAAGCTACAATCTCACCAAATATAA 906 0.4713 MQSHLLVGPIFIAPYGSSNPFLSAAPPTLHRRRLITASSSSSSAAAINGGRSHYAVLGVARTASAVDIKRAYRLLARKYHPDVSKDPCAAELFKSIRHAYEVLSNQATRIQYDQELQFGHKPYRDKWSYSTEFEDQPRTSRWANLRKKMHDERYWEHYDVNEGYYSSETDEEEDEGNLDEERGSFFEVLRSAFMLLLLLQTLGSRLSLTFSSLTALFDKKLDTGYKFGYVIAWILGGRGGILLTLCLSFTSWVCGKTSSSVVTLVMVAMWVGSYLARYAPLPQGALLTLLYMSIKLQSHQI* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02493 301 Pfam DnaJ domain 53 113 IPR001623 -
Rops8g02493 301 FunFam Uncharacterized protein 49 196 - -
Rops8g02493 301 Gene3D DnaJ domain 50 194 IPR036869 -
Rops8g02493 301 CDD DnaJ 53 105 IPR001623 -
Rops8g02493 301 PRINTS DnaJ domain signature 72 87 IPR001623 -
Rops8g02493 301 PRINTS DnaJ domain signature 88 108 IPR001623 -
Rops8g02493 301 PRINTS DnaJ domain signature 54 72 IPR001623 -
Rops8g02493 301 ProSiteProfiles dnaJ domain profile. 52 116 IPR001623 -
Rops8g02493 301 SMART dnaj_3 51 108 IPR001623 -
Rops8g02493 301 SUPERFAMILY Chaperone J-domain 51 123 IPR036869 -
Rops8g02493 301 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 27 120 - -
Rops8g02493 301 ProSitePatterns Nt-dnaJ domain signature. 93 112 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02493 Rops-Chr8 57274415 57276871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02493 35 117 Miscellaneous Gene Families AT1G79030 38.372 8.39e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02493 - - gmx:100791619 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02493 8 57274415 57276871 Rops8g02493 8 57274415 57276871 ECH