Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02489 ATGGCCGCTGTTGCTCCATCCTCTGACAAAGCTGCAGATTTACTGCAGAATTTGTCCCTGGATTCGGAGCCCAAGACCACTGGAGTTGCTGAGCCTGCAAAGAAGAATGGACCTGTTTTTTCCAATGTTGCAGCTAAGCGGATGGCCAAGCCATTCAATCCAAATCCATGCTTCATTCCAAATGGATATCCTTCTACTGCATACTATTATGGAGGTTATGATGGGCAAGGTGATTGGAATATTTATTCCAGATATATGAACCTTGATGGAGGGATGGCTCAAGGTGTTTATGGGGATAGCTGCTCTTATATGTACCATCAAGGTTATGGTTATACACCATATGGAGTGTATGCACCGCCCAATTCCTCTTCTCCAAATGTTCAACATGACAGTCAGCTCTATGAGCTGCAACAGTACCAAGATCTGCAACAGTACCAATATCCTTGTTCTTATTACAAATCTCCAGCTTCTGCTGATGCATTGTTTGCTTCAAACAAAATCAGTGTTCCACCAGGGGAAATACTGACTGCAGTTAATTCTGGTCATGTCCCTTCATCAAATGTTATGAATAAAGGAAACACTGTTAACATGGCCAATGGTCATTGTACAAATAAAAATGGGTTAAAGGCATTTCCCCAGCAAACATCTTTGAACACAAATGATTCTTATCAAGGGGCTAGCTTGCCAGCTTATGCTCCTTTGTCAGGATATCAGGGTCCAAGAATGAGTCACAGTACACAGTCAGCAGTGCCTTCAGATGTGTCATTAGTTTCTGATAGACAGTCCAAACATGGAGCAAATGTTGGATTATCTTCACCAGTGGTGCCTGTTAAAGATTTTGCATCTCAAAGGAATCAAAGACATCCTCAGCCACTTCCACAATTCACAAACTTGAATGGTTCCAGACATCCATCTGGGATGGAACTGGTTTCTGGATTCATGAACAGGATGTATCCAAGCGACAGGATGTTCAGCCAATATGGTAACACATTTGGAGCTAGTTCTCGTTTAGGATCTGCTGCATATGGATCTAGAACAGGCTCTGTTGATAACAAGCTTAAAGCCACAGGTAACGGCTGTGTTGTTAACAATTTGAAAAAAAATATGAATGGTTTCAGTGAGCTAAATAAGGGACCCAGAGCTACCAAGAGTTATGATAATGGAAGCATAAAGAACCTTGGACCTGTCACATTATTACTCAAAGGACAGAATCTTCCGGTGAAGAATGATAACAAAGAAGTGACTCTGGTTCCCAATAAGGAACAGTATAATGGGGAAGATTTTTCTGAGAACTATTCTGATGCAAAATTTTTTGTCATCAAATCCTATAGCGAGGATGATATTCATAAAAGCATAAAATATAGTGTTTGGGCAAGCACCCCTAATGGCAACAAAAAGCTGGATGCAGCATATCAGGAAGCCAAGGAGAAGCCTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGGCAATTTGTTGGTTTAGCAGAGATGGTGGGTCCTGTTGATTTTGGTAAGACTGTGGAGTATTGGCAACAGGACAGGTGGACTGGTTGCTTTTCTGTTAAGTGGCATGTCATAAAGGATATTCCAAATAGTGTGTTGAGGCACATAACACTAGAAAACAATGAAAACAAACCTGTAACAAATAGTAGGGATACTCAGGAGGTTAAGTTTGAGAAGGGTATTCAAATTGTCAAAATTTTCAAGGATCATTCATGCAGAACAAGCATATTGGATGATTTTGGGTTTTATGAGGCTCGTGAAAAGGCGAATCAAGAGAGAAAATCTAAGGACCAGCAGTTTCCAAAACAGGTCAACAAGGCTAGTGACTTGACAATTGGAACAATTACATTACCCAAGTCTCTTGATGCAACCTTGATGAATGAATCAGCTACTGCAGATTCAGCAGAAGGGAAGGTGAAAGCAGAGGAGCTGTTAGAAAGTAATTGA 1962 0.4098 MAAVAPSSDKAADLLQNLSLDSEPKTTGVAEPAKKNGPVFSNVAAKRMAKPFNPNPCFIPNGYPSTAYYYGGYDGQGDWNIYSRYMNLDGGMAQGVYGDSCSYMYHQGYGYTPYGVYAPPNSSSPNVQHDSQLYELQQYQDLQQYQYPCSYYKSPASADALFASNKISVPPGEILTAVNSGHVPSSNVMNKGNTVNMANGHCTNKNGLKAFPQQTSLNTNDSYQGASLPAYAPLSGYQGPRMSHSTQSAVPSDVSLVSDRQSKHGANVGLSSPVVPVKDFASQRNQRHPQPLPQFTNLNGSRHPSGMELVSGFMNRMYPSDRMFSQYGNTFGASSRLGSAAYGSRTGSVDNKLKATGNGCVVNNLKKNMNGFSELNKGPRATKSYDNGSIKNLGPVTLLLKGQNLPVKNDNKEVTLVPNKEQYNGEDFSENYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHVIKDIPNSVLRHITLENNENKPVTNSRDTQEVKFEKGIQIVKIFKDHSCRTSILDDFGFYEAREKANQERKSKDQQFPKQVNKASDLTIGTITLPKSLDATLMNESATADSAEGKVKAEELLESN* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02489 653 MobiDBLite consensus disorder prediction 282 303 - -
Rops8g02489 653 FunFam YTH domain family 1, isoform CRA_a 414 587 - -
Rops8g02489 653 ProSiteProfiles YTH domain profile. 435 572 IPR007275 GO:0003723
Rops8g02489 653 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 79 612 IPR045168 -
Rops8g02489 653 MobiDBLite consensus disorder prediction 634 653 - -
Rops8g02489 653 CDD YTH 436 572 IPR007275 GO:0003723
Rops8g02489 653 Pfam YT521-B-like domain 435 573 IPR007275 GO:0003723
Rops8g02489 653 Gene3D ph1033 like domains 412 586 - -
Rops8g02489 653 MobiDBLite consensus disorder prediction 283 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02489 Rops-Chr8 57177927 57182554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02489 - K20102 gmx:100818027 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02489 8 57177927 57182554 Rops8g02489 8 57177927 57182554 ECH