Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02469 ATGGGTGCGAGTCGAAAGCTTCAGGGAGAGATAGATCGGGTTCTCAAGAAGGTTCAAGAAGGCGTTGAAGTCTTCGATAGTATTTGGAACAAGGTTTACGACACAGACAATGCAAACCAGAAGGAGAAATTTGAGGCAGACCTCAAGAAGGAGATTAAGAAGCTCCAGAGATACAGAGACCAAATTAAGACTTGGATTCAGTCCAGTGAGATAAAGGATAAGAAGGTAAGTGCCTCGTATGAGCAGGCTCTGGTGGATGCACGCAAGCTAATTGAGCGGGAAATGGAAAGATTTAAAATCTGTGAGAAGGAAACTAAGACCAAAGCATTCTCCAAAGAAGGCTTGGGTCAACAGCCTAAGACTGATCCAAAAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTAAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAACTTTGAAGCTGAGCTTGAAGGTCTTTCTGTCAAGAAAGGAAAGAACAGGCCACCCAGATTGACACATTTAGAGACATCGATTACTAGGCACAAGGCTCATATAAAGAAATGTGAATTCATTTTGAGGCTACTAGATAATGATGAATTAAGTCCTGAGCAGGTTAATGATGTCAAAGATTTCTTGGACGATTATGTAGAGCGTAATCAGGAGGATTTTGACGAGTTCAGTGATGTTGATGAACTATACAGTTCATTACCTTTAGACAAAGTGGAGACTCTAGAAGATCTTGTTACAATTCCCCCTGGTCTTTCTAAGGTGGCACCTTGTCTTAGCTTGAAGAATTCTGCGTCAGCATCGGCATCACAATCTGCGTCAGCATCGGCATCACAGACATCTGAGCAAGCCGATGACACAGCATCCCAGGATAGCAATTCTGACATCGTTGCAAAAACGCCACCACCTAAAAGTGGTGGAATGAGTTCTGCTACTTCAACACCTGCTGGGAACCATGCTACTCCTGTTTCCATGAATGTTTCAGGTCATAACTTATCCAGTGCACCAGCTGCTGCAGTCCTACCTGGTTCAAATTCTGTTCGAAATGCCTTGGAGAATGCTAATGTTGCCAATTCTTCATCTTCTGTAAATCAGTCTACCTCTACAAAGGAAGAAGAGATTAATAGCTTCCCTAGTCGGAAACCATCTCCATCGCTTTCTGATGCAGCACTTGTGAGGGGAAGAAACAGCCTGTCAAATCAAACAACAGCTAGCATCCCTCTTGGTGTTTCCAGCAATGCGGCCCTTGGTTCAGTCCCTTCTGCCTCTGAAATAACAAAGAGAAACATATTGGGAGCTGATGATAGACTTGGAAGTAGTGGAATGGGACAGCCACTTGTATCCCCGCTAAGTAATAGATTGATTATGCCTCAGGTTGCGAAGACTAATGATGGAACTGCTCCAGTTGAATCTAGTGCTGTTAATGAAGCTGCAGCTGTATCTGGGAGAGTTTTCTCCCCTTCTGTGGTTCCTGGCATGCAATGGAGACCTGGAAGTCCCTTTCAGAATCAGAATGATGCAGGGCAGCTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAGCAACAAGGGCCCAGTACACTTCTTAATATGCCTTCTCCTGTTGGAGGAAACCATAAGCAGTTTTCTGCCCAACTGCAAAATCCCCTTTTGCAGCAGTTTAACTCTCAAGGGCCATCTGTTTCTTCTCAATCTGGTATGGGACTTGGAGTCCAGTCCCCGAGTCTCAGTGGTATTTCTCCTGTCTCGATGCAGCAGCCACCCAGTTCTGTCCATTCCCCCTCTAGTCAGCAACCACTGATTCCAGGTGTTGCTAAAGATGTAGATGTTGGCAATTCTAAAATTGAAGAACAGCAACAGCAGCATTTTCCTGATGAGTCGACAAATGAATCCACTGCTAGCACTGGGATTGGCAAGAATCTCATAATTGAAGATGATTTGAAATCAGCATATGCTGTAGATTCACCTGCAGGAGTATCTGCCTCTCTTCCAGAATCTGCTCAAACTTCCAGGGATATTGATTTGTCTCCTGGCCAACCTTTACAATCTAATCAAACTACTGGTAACCTTGGTGTAATTGGAAGAAGAAACGGTGCTGAACTTGGAGCCATTGGTGATAATTTTAGTGGATCGAGTGTTATTTCTGGTGGAGTGCGTGATCAACTATATAATTTACAAATGCTTGAGGCAGCACACTCCAAAATGCCACAAGCTAAAGACTCGGAACGTCCTAGGACTTATACTCCTAGGCACCCAACATTAACACCTCCTAGCTATCCTCAAGTACAGGCACCTATAGTTAATAATCCTGGCTTTTGGGAGAGAGTAGGTCTTGAACCATTTGGCACTGACACCCTGTTCTTTGCATTTTATTATCAACAGAACACTTACCAACAATATTTGGCTGCAAAGGAGCTAAAGAAGCAGTCTTGGAGATACCACCGAAAGTATAATACATGGTTTCAGCGACATGAAGAGCCCAAAGTTGCTACTGATGAATATGAGCAGGGAACATATGTGTACTTTGATTTCCATATTGCAAATGATGACCTACAACATGGATGGTGTCAAAGAATCAAGACCGAATTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTCTTGTATAG 2661 0.4329 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVETLEDLVTIPPGLSKVAPCLSLKNSASASASQSASASASQTSEQADDTASQDSNSDIVAKTPPPKSGGMSSATSTPAGNHATPVSMNVSGHNLSSAPAAAVLPGSNSVRNALENANVANSSSSVNQSTSTKEEEINSFPSRKPSPSLSDAALVRGRNSLSNQTTASIPLGVSSNAALGSVPSASEITKRNILGADDRLGSSGMGQPLVSPLSNRLIMPQVAKTNDGTAPVESSAVNEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKYQQVQQQGPSTLLNMPSPVGGNHKQFSAQLQNPLLQQFNSQGPSVSSQSGMGLGVQSPSLSGISPVSMQQPPSSVHSPSSQQPLIPGVAKDVDVGNSKIEEQQQQHFPDESTNESTASTGIGKNLIIEDDLKSAYAVDSPAGVSASLPESAQTSRDIDLSPGQPLQSNQTTGNLGVIGRRNGAELGAIGDNFSGSSVISGGVRDQLYNLQMLEAAHSKMPQAKDSERPRTYTPRHPTLTPPSYPQVQAPIVNNPGFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02469 886 MobiDBLite consensus disorder prediction 354 382 - -
Rops8g02469 886 MobiDBLite consensus disorder prediction 564 610 - -
Rops8g02469 886 MobiDBLite consensus disorder prediction 669 700 - -
Rops8g02469 886 Coils Coil 41 61 - -
Rops8g02469 886 Coils Coil 132 159 - -
Rops8g02469 886 MobiDBLite consensus disorder prediction 110 131 - -
Rops8g02469 886 MobiDBLite consensus disorder prediction 271 328 - -
Rops8g02469 886 MobiDBLite consensus disorder prediction 354 386 - -
Rops8g02469 886 Gene3D - 725 881 IPR038635 -
Rops8g02469 886 MobiDBLite consensus disorder prediction 671 700 - -
Rops8g02469 886 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Rops8g02469 886 PIRSF NOT_su_3_5 1 886 IPR012270 GO:0006355|GO:0030015
Rops8g02469 886 MobiDBLite consensus disorder prediction 743 771 - -
Rops8g02469 886 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 726 881 - -
Rops8g02469 886 Pfam NOT2 / NOT3 / NOT5 family 744 880 IPR007282 GO:0006355
Rops8g02469 886 MobiDBLite consensus disorder prediction 564 614 - -
Rops8g02469 886 PANTHER CCR4 NOT-RELATED 24 883 IPR040168 GO:0030015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02469 K12580 - gmx:100785965 1485.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02469 8 56969536 56982209 Rops8g02469 8 56969536 56982209 ECH