Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02468 ATGGCTGATGTTTTGACCAAGACAATCTTTGTTTCATCTTGGCATGGACACAGACAACAACATCATCGAAAGGTTTCCACGGTTCCCAAGAATTGTAGCTTCGGTTCTGGATTTGGAAGCTTCCCTTCTTTGAAGCTAAAATCTCAGGTTCTCAGATCTTCACCCTCTTCATCTGAGTTTCGTGGTAAAAAGCTCGTCTTTCGTGTAAATAGAGCAATATCCAGCAGAGCCACTTCACAATTTCGAGCTTCAACTGGGGCTCAGATGACCCTTAGAATAGGGAAAGTTCAGAAATGGTGGGAAAAAGGGCTTCAACCAAACATGAGAGAGGTGACTTCTGCACAAGACCTTGTGGATTCACTGTTAAACGCAGGGGACAAGCTTGTGGTCGTTGATTTCTTCTCTCCTGGTTGTGGTGGCTGTAAAGCCCTTCATCCTAAGATATGTCAACTGGCAGAGATGAATCCTGATGTTCAGTTCCTTCAGGTGAACTATGAGGAGCATAAATCCATGTGTTATAGCCTTAATGTTCATGTCCTTCCCTTCTTCCGCTTTTATAGAGGTGCTCATGGTCGCTTATGTAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAGAGATGCATTGGCTAAACATACTCCAGATAGATGTAGCTTGGGCCCAACCAAGGGGTTAGAGGATAAAGAGCTCCTTGCTCTGGCTGCCAACAAAGATCTTTCCTTCACATACACACCAAAACCCCTTCAGCCTGCAACTGAAGCAGCTCCTGCTTCTCCTAGTTCAGAGTCCCTTCCTTTGCCTCCATTGACCCCCAATTCCGAGGTCTCCAAAGAGAGAACCCTGACCACTGCTGGAAGATGA 864 0.4572 MADVLTKTIFVSSWHGHRQQHHRKVSTVPKNCSFGSGFGSFPSLKLKSQVLRSSPSSSEFRGKKLVFRVNRAISSRATSQFRASTGAQMTLRIGKVQKWWEKGLQPNMREVTSAQDLVDSLLNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHTPDRCSLGPTKGLEDKELLALAANKDLSFTYTPKPLQPATEAAPASPSSESLPLPPLTPNSEVSKERTLTTAGR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02468 287 ProSiteProfiles Thioredoxin domain profile. 77 215 IPR013766 -
Rops8g02468 287 FunFam Thioredoxin-like 1-2, chloroplastic 97 215 - -
Rops8g02468 287 SUPERFAMILY Thioredoxin-like 97 213 IPR036249 -
Rops8g02468 287 MobiDBLite consensus disorder prediction 268 287 - -
Rops8g02468 287 CDD TRX_family 124 188 - -
Rops8g02468 287 MobiDBLite consensus disorder prediction 245 287 - -
Rops8g02468 287 Gene3D Glutaredoxin 96 214 - -
Rops8g02468 287 PANTHER THIOREDOXIN, MITOCHONDRIAL 71 246 - -
Rops8g02468 287 Pfam Thioredoxin 119 189 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02468 Rops-Chr8 56949187 56951480 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02468 - - gmx:100816892 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02468 8 56949187 56951480 Rops8g02468 8 56949187 56951480 ECH