Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02451 ATGGCACGGGATGGGGATCCTCTTGTTGTTGGGGGTGTGATTGGGGATGTTCTCAACCCTTTTACAAGCTCAGTTTCTTTGAGTGTTGTAATCAATAACAGAGAGATTAGCAATGGCTGTGAATCGAAGCCCTCTCAAGTGGTTAACCGCCCAAGAGTTAATGTTGGTGGTGAAGACCTCAGGACCTTCTACACACTGGTTTTGGTGGACGCAGATGCACCTAGCCCTAGTAACCCTGTCTTGAGGGAATACCTGCACTGGATGGTGACGGATATTCCAGCTACCACAGGAGCAAACTTTGGGAAAGAGGCTGTGTTTTATGAGAGCCCGCAACCTTGGGCAGGGATTCATAGACTTGTGTTCGTGTTGTTCAAGCAATTGGGTAGAGACACTGTGTTCGCCCCAGAATGGCGTCACAATTTCAATTCCAGAAACTTTGCTGAAATTAATAATCTGGCACCTGTTGCAGCTGTTTATTTCAATTGTCGAAGAGAGCGTGGTTGTGGTGGAAGGAGAAGTTAA 522 0.4693 MARDGDPLVVGGVIGDVLNPFTSSVSLSVVINNREISNGCESKPSQVVNRPRVNVGGEDLRTFYTLVLVDADAPSPSNPVLREYLHWMVTDIPATTGANFGKEAVFYESPQPWAGIHRLVFVLFKQLGRDTVFAPEWRHNFNSRNFAEINNLAPVAAVYFNCRRERGCGGRRS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02451 173 CDD PEBP_euk 32 160 IPR035810 -
Rops8g02451 173 SUPERFAMILY PEBP-like 12 165 IPR036610 -
Rops8g02451 173 Pfam Phosphatidylethanolamine-binding protein 62 147 IPR008914 -
Rops8g02451 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 11 166 IPR035810 -
Rops8g02451 173 Gene3D - 3 168 IPR036610 -
Rops8g02451 173 FunFam Terminal flower 1 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02451 Rops-Chr8 56523731 56527657 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02451 K16223 - gmx:100796994 278.1