LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g02445	ATGGAATTGGCAATGAAGGTCGCTGAGGCTGTCCATGTGCTGAACCACGATACCCAATCCTGCAACCGCGTCGCAGCCAATCAATGGCTCGTTCAGTTCCAACAAACCCACGCCGCCTGGGACGTCGCCACCGCCATCCTCACCTCCGATCACCGCCTTCCCCTCCCATCCAATTTCGAGGTCGAGTTCTTCGCCGCTCAGATTCTCAAACGCAAGATACAAAATGAAGGTTATCTACTGCAATCAGGACCTAAGGATGCTTTGTTAAATGCCCTTCTTCTTGCAGTCAAAAGATTTAGTAGTGGTCCTCCCCAGCTTTTAACACAGATCTGTCTTGCACTCTCTTCTCTCGTACTACAAGTTGTGGCGCATGGAAACCCAATTGAGCAGCTTTTTTACAGTCTTCAGAATCTGCAGAGCCAGGATAATGGCAATATTGCTGTCCTGGAGATGCTCACTGTCCTGCCAGAGGAAGTTGTTGACAGCCAATGTATTGATTCTAAAATTAGTTCATTACACAAAAGCCACTATACCCAAGAGCTTCTCTCCCACACGCCTACGGTTCTTGAGTTCTTGCTGCAGCAATCTGAAGTAAATTTTGATGGTTCGGTGCAACAGCATGAAAGGAACAGGAAAATTTTGCGCTGCTTATTGAGCTGGGTGAGAGCAGGTTGCTTCTCTGAGATTTCTCCAGGAACATTGCCAGCTCACCCACTTCTAAATTTTTTATTCAACTCATTGCAGGTTCCTTTATCATTTGATCTGGCCATTGAAGTTCTTGTTGAACTTGTGACTAAACATGAGGGAGTGCCCCAAATTTTGTTGTGCAGAGTACATTATCTGAAGGAAGTACTTCTTTTTCCAGCTCTTGCTAGGGGAGACATGAAAGTAATTGGTGGCCTTGCATGCTTGTTATCAGAAATTGGGCAGGCTGCTCCATCTCTAATTGTAGAAGCAAATGCAGAAGCCCTTGCATTGGCAGATGCACTCCTGAGCTGCATGTCGTTTCCAAGTGAAGATTGGGAGATTGCAGACTCAACACTGCAGTTTTGGTCTACTCTTGCAAGCTATATACTTGGCATTGATGATGATGATGCAAAAAGTAGAAAACATGTGGAAGACATATTTTCGCCTGTGTTCTCAGCATTACTTGATTCACTGTTATTACGTTCTCAGGTGGATGACTCTACGTACAATGATGAGAGAAGGGTGATTGATTTGCCTGATGGCCTTGTCCATTTCAGAATGAACCTGGTAGAACTTTTGGTGGATATATGTCACCTGTTAGGATCTTCTATATTCATGCAAAAGCTCTTTATTGGTGGATGGGCATCTCTCAATCTACCAATCCCTTGGAAGGAAGTGGAAAGCAAGCTTTTTGCTCTTAATGCTGCTGCTGATGTAATCATACAGGATGGCCAAAGTTTTGATTTCTCTGTAGTCATGCAGTTGGTGACCATGTTGTCCACTAAACCTTCTGATGGCTTGAAGGGTTTCATTTGCATTGTATACAGATCTCTAGCTGATGCTATTGGTTCTTATTCCAAGTGGATATCTGCTTTTAAGGAAAATTTTAGACCCTTGCTATTATTTCTTGCTATTGGGATTTCAGAGCCTCTTTCTTCAAATGCTTGTGCATCTGCACTGCGTAAAGTCTGTGAAGATGCTTCTGTAGTAATTTATGAACCTTCAAATTTGGAAATTTTAATGTGGATAGGAGAGGGGTTAGAGAAGTGGCATTTATCTTTGGAAGATGAGGAAGAAATTATGCATGCAATAAGTCTGGTCCTTGGTTCTGTTCCCAATCGAGAACTAAAGAGTAATTTATTGGCTAGATTGCTTTCATCTTGCTATGAAGCTATTGGGAAACTTGTCGATCCAGAGAACAACCTTTCTCTAAAACAGAACCCTGCTTCTTATACTCAAATTTTGAATGCTGCCTCTAGAGGATTGCACAGAATGGGAACTGCATTCAGTCATCTTTCCATATCTGTGGGGCCTGAACCTGAAGCAGATGATTTGATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAAATTTTTAGCTCTGACCATATGGAGAGTGGTAATTTATCCATAGCAGCTTGCCGAGCTCTTTCGCTAGCTATTCAATCTTCAGGTCAGCATTTTGTGACCCTACTGCCCAAATTGCTGGATTGGCTTTCGACAAATTTTGTTTTGTACCAAAGTCATGAGTGTTATATAAGAACTGCTTCCATTGTCTTTGAAGAATTTGGTCACCGAGAGGAGTATGGACCTTTATTTGTCACTATGTTTGAAAGATTTACTCATGCAACTTCTGTAATGGCTCTAACTTCCTCCTACATATGTGACCAAGAGCCTGACTTAGTGGAGGCCTACACCAATTTTGCATCCACATTTGTTCGTTCCTGTAACAAGGATGCTCTTTCAGCTTGTGGTTCTCTTCTTGAAGTTTCTATCCAGAAAGCAGCTATATGTTGCACAGCCATGCACCGCGGTGCAGCTCTAGCTGCAATGTCATACTTGTCTTGTTTCTTAGATGTGGGCCTTGTCTCTTTGTTAGAGTGTATGAATGGTATTATTGAGGGATCATTCAACACCACGGCCATTCAGGTCATATCTCACAGTGGGGAGGGCCTTGTATCTAATGTGGTGTATGCTTTACTTGGTGTGTCTGCAATGTCACGGGTTCACAAGTGTGCAACAATTTTACAACAACTTGCAGCAATTTGCACTTTATCCGATAGAACAACATGGAAGGCTATACTTTGCTGGCAAACTCTTCACAGATGGTTACAGTCAGCGGTTCAGGCTCTTCCTGCTGAATACCTAAACCATGGAGAAGCAGAGTCCCTAGTGCCACTTTGGTCCAAGGCCCTTGCTGATGCAGCTTCTGATTATCTTGAGAGCAAGAACTCTGATGGATTAAAAAATTCAAGAGTTGACGAGGCACCTTGGTCTATTCCTGAAGGTACCTGTATCATTTGTTGTAAATTGATGAGGATGGATATCCATGATGGAACATCCGCAGATGGAGTTAGAGATTTTGAAGGAAAGGAACCAATACCAACAAAATCCTCCTCTTTGTTACAGAAGCTAAAGCGAAAACCCTACGCCGACGGAGACTCCCATTCATCATCATCACACATAACTAGTGGCTGTTCTTCCTGTTAA	3183	0.4295	MELAMKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTSDHRLPLPSNFEVEFFAAQILKRKIQNEGYLLQSGPKDALLNALLLAVKRFSSGPPQLLTQICLALSSLVLQVVAHGNPIEQLFYSLQNLQSQDNGNIAVLEMLTVLPEEVVDSQCIDSKISSLHKSHYTQELLSHTPTVLEFLLQQSEVNFDGSVQQHERNRKILRCLLSWVRAGCFSEISPGTLPAHPLLNFLFNSLQVPLSFDLAIEVLVELVTKHEGVPQILLCRVHYLKEVLLFPALARGDMKVIGGLACLLSEIGQAAPSLIVEANAEALALADALLSCMSFPSEDWEIADSTLQFWSTLASYILGIDDDDAKSRKHVEDIFSPVFSALLDSLLLRSQVDDSTYNDERRVIDLPDGLVHFRMNLVELLVDICHLLGSSIFMQKLFIGGWASLNLPIPWKEVESKLFALNAAADVIIQDGQSFDFSVVMQLVTMLSTKPSDGLKGFICIVYRSLADAIGSYSKWISAFKENFRPLLLFLAIGISEPLSSNACASALRKVCEDASVVIYEPSNLEILMWIGEGLEKWHLSLEDEEEIMHAISLVLGSVPNRELKSNLLARLLSSCYEAIGKLVDPENNLSLKQNPASYTQILNAASRGLHRMGTAFSHLSISVGPEPEADDLILSLLRVFWPILEKIFSSDHMESGNLSIAACRALSLAIQSSGQHFVTLLPKLLDWLSTNFVLYQSHECYIRTASIVFEEFGHREEYGPLFVTMFERFTHATSVMALTSSYICDQEPDLVEAYTNFASTFVRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLECMNGIIEGSFNTTAIQVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSDRTTWKAILCWQTLHRWLQSAVQALPAEYLNHGEAESLVPLWSKALADAASDYLESKNSDGLKNSRVDEAPWSIPEGTCIICCKLMRMDIHDGTSADGVRDFEGKEPIPTKSSSLLQKLKRKPYADGDSHSSSSHITSGCSSC*	1061

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g02445	1060	FunFam	ARM repeat superfamily protein	2	962	-	-
	Rops8g02445	1060	MobiDBLite	consensus disorder prediction	1036	1060	-	-
	Rops8g02445	1060	PANTHER	TRANSPORTIN 3 AND IMPORTIN 13	6	973	-	-
	Rops8g02445	1060	MobiDBLite	consensus disorder prediction	1046	1060	-	-
	Rops8g02445	1060	Pfam	Exportin 1-like protein	103	260	IPR013598	-
	Rops8g02445	1060	SUPERFAMILY	ARM repeat	1	870	IPR016024	-
	Rops8g02445	1060	Gene3D	-	3	970	IPR011989	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g02445	K15436		-	gmx:100808691	1746.48

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops8g02445	8	56272105	56305557	Rops8g02445	8	56272105	56305557	ECH