Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02443 ATGGCTTCAAATCTTAGAACCAACAGTTATCTTCGCCATGTGGAATCTATGAAGCTTCTTCCATCCGGTGCTGGCCACATTTCTCACTTGAACGCTGTGATTCTTGGTGAATCTCTTGCCTCTGAAGAGGATGATTTGGTGCTTCCAAACCATGATTTTGCAAGCCAAGCAAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAAGAGATCAATTGAGGATCCTGCTGGATTCTGGTCTGAAATTGCATCAGAGTTCTATTGGAAACAGAGATGGGGTGATAAAGTCTATGATGAAAATTTTGATGTTAGGAAAGGCAATATTAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCAGTTATAATTGCTTGGATAGACATATTGAAGCTGGACTTGGTGACAAAACGGCTATTTACTGGGAAGGCAATGAGCCTGGTTTAGATGGTACTTTAACATACACTCAGCTTCTCCATCAAGTTTGCCAGGTTGCAAACTACCTGAAAGATATTGGTGTGAAAAAGGGAGATGCTGTAATTATTTATTTGCCTATGCTTATGGAGCTTCCCATCACAATGCTTGCCTGTGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGAATCTCTTGCTCAAAGAATCACTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAGGCTATCTATCTGAAAGACATAGTTGATTCTGCCATCAATCAGTCAGCCCAAAATGGGGTCTCTATAGATGTATGCCTAGTTTATGAAAACCCATTGGCAATGAAAAGGGAAGATACCAAATGGAAGGAAGGGCGAGATATATGGTGGCAGGATGTCATTCCTCGATATCCAACTACTTGTCCAGTGGAGTGGGTTGATGCAGAAGATCCACTTTTTCTACTTTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCCACAACATTTAAGTATGCATTTGACTACAAGCCATCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATCTCACTTATGGACCCATGCTTAATGGTGCAACTTCTGTTGTGTATGAAGGGGCTCCCAATTATCCTGATACTGGGCGTTGTTGGAACATCGTTGACAAATACAAAGTGACAATATTCTACACTGCTCCCACATTGATAAGGTCCCTCATGCGCGATGGTGATGAGCCTGTTACACGCTACTCAAGGAAATCTTTACGAGTCCTGGGAAGTGTTGGCGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACTGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAAAGGTGATGAAATAGATGGCAAGTGCAGTGGCTATTTGTGCGTTAAGAGATCATGGCCCGGGGCATTTAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCGGGCTACTATTTTAGTGGTGATGGCTGCAGCAGGGATAAAGATGGATACCATTGGCTCACCGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTCTAGTTTCACATCCTAAATGTGCAGAGGCTGCTGTGGTTGGTATGGAGCACGAGGTCAAAGGACAAGGAATCTATGCATTTGTTACACTTGTAGGAGGTGTTCCTTACAGTGAAGAACTGCGGAAGGAGCTCATAATCACAGTTAGAAAGCAGATAGGAGCCTTTGCTGCACCTGACAAAATTCATTGGGCACCTGGCCTCCCAAAAACAAGGAGTGGAAAGATAATGAGAAGAATTTTGAGAAAAATTGCTTCCAGGCAGCTAGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTTAATCAACTTATAGAACTTGCTGATGCCTAA 2097 0.434 MASNLRTNSYLRHVESMKLLPSGAGHISHLNAVILGESLASEEDDLVLPNHDFASQANVQSPEQYLKMYKRSIEDPAGFWSEIASEFYWKQRWGDKVYDENFDVRKGNIKIEWFKGGITNISYNCLDRHIEAGLGDKTAIYWEGNEPGLDGTLTYTQLLHQVCQVANYLKDIGVKKGDAVIIYLPMLMELPITMLACARIGAVHSVVFAGFSAESLAQRITDCKPKVVITCNAVKRGSKAIYLKDIVDSAINQSAQNGVSIDVCLVYENPLAMKREDTKWKEGRDIWWQDVIPRYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYLTYGPMLNGATSVVYEGAPNYPDTGRCWNIVDKYKVTIFYTAPTLIRSLMRDGDEPVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGDEIDGKCSGYLCVKRSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGMEHEVKGQGIYAFVTLVGGVPYSEELRKELIITVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADA* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02443 698 FunFam Acetyl-coenzyme A synthetase 569 698 - -
Rops8g02443 698 Pfam AMP-binding enzyme 135 573 IPR000873 -
Rops8g02443 698 PANTHER ACETYL-COENZYME A SYNTHETASE 49 694 - -
Rops8g02443 698 NCBIfam acetate--CoA ligase 60 694 IPR011904 GO:0003987|GO:0016208|GO:0019427
Rops8g02443 698 Pfam AMP-binding enzyme C-terminal domain 582 660 IPR025110 -
Rops8g02443 698 Gene3D - 569 698 IPR045851 -
Rops8g02443 698 Gene3D - 47 568 IPR042099 -
Rops8g02443 698 Hamap Acetyl-coenzyme A synthetase [acs]. 42 696 IPR011904 GO:0003987|GO:0016208|GO:0019427
Rops8g02443 698 ProSitePatterns Putative AMP-binding domain signature. 312 323 IPR020845 -
Rops8g02443 698 Pfam Acetyl-coenzyme A synthetase N-terminus 65 125 IPR032387 -
Rops8g02443 698 CDD ACS 63 685 - -
Rops8g02443 698 FunFam Acetyl-coenzyme A synthetase 45 568 - -
Rops8g02443 698 SUPERFAMILY Acetyl-CoA synthetase-like 51 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02443 Rops-Chr8 56252515 56261432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02443 5 697 Acyl Lipid Metabolism Gene Families AT5G36880 82.973 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02443 K01895 - gmx:100808939 1367.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02443 8 56252515 56261432 Rops8g02443 8 56252515 56261432 ECH