Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02433 ATGGACATGAATTTGATGATGAAGAAAGGGAAGTTGCTCAGAAAATCTTTGACCAATCTCATGCACCATCATTCATCAAAGAGCATGGCACGTGATGATAATGCATTTGGGGTACATTATTATGAATTCTCTTGTAGTAACAGCCCAAATCCTGTTTTTTTACACATGCCAAAGCGCAAGCACCATTTCAACTTCCCTTGTATCAATGCCCCTGAGGTTTTGGAAGATGAACCTCAATTGTCATCAGCACTTGAAGTTGAAAGTGATGTGCCTAAGGCTGTGGTTATGGTTCCCAAGACCCCAGAATATATGTTCAATTTTAGGTTTGATGCATCTGAGTTTGCTAATGGAGAGAAAAAGAGCCCACTGCTCTCACCCTTCTCTGTGAGGATATCAAATTACTCTGCAATAGATGAAAATGATGAGGTTGGAAATGGTCAAGTTGATGATCAAGCTGAGGATTTCATCAGAAGGTTCCATGAACAGCTAAGGACACAAAGTCGCATGCAATTGTTACAGTACCAAGAGATGTAA 534 0.4026 MDMNLMMKKGKLLRKSLTNLMHHHSSKSMARDDNAFGVHYYEFSCSNSPNPVFLHMPKRKHHFNFPCINAPEVLEDEPQLSSALEVESDVPKAVVMVPKTPEYMFNFRFDASEFANGEKKSPLLSPFSVRISNYSAIDENDEVGNGQVDDQAEDFIRRFHEQLRTQSRMQLLQYQEM* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02433 177 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 175 - -
Rops8g02433 177 Pfam Cotton fibre expressed protein 146 177 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02433 Rops-Chr8 56074063 56074707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02433 - - gmx:100806803 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02433 8 56074063 56074707 Rops8g02433 8 56074063 56074707 ECH