Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02431 ATGCCGCTATCCACCACCGCCTCATCTCCATCGGCGTTAGAAGAGGGATGTTTACCTCACGACGGAGACGGTTACGAACTTAACGATGACGGTGCTTCGTGCGACGTCGTTTCACTGGACGAGGAGGGTTTCCCGTCACAAGTCCCCGGCGAAGACGGTTCACCAAACAGATCATCGGAAAAGAGTAGTTTTGCCGCCGATTTCTATCACTGCGGAACCGATTGGTCCTCGTTGTCGTTGTTGCCAGAACATAGAGATCTCGCGCGCGATTCGGGGAAGAAGCTGAAGCAGGCTAATTTGTTCCAGATTTGGGGCTTCGAAAGAAACGGTGCCGTTAGTTCTGTTGAATCTGAACCCAATCAAAGTGGTTATCGTGATGAAGGAGGTGAGGGCAGTGCTTTTCAGAAAAGGAAGATTGGGAAACCTGGAAATTGGGGTTCGATTTTGCGTGACACTGGGAAAGCTTTTGAGAATCCAAAATCTTCTCGCAAGAGAAAAGATACCCCTGGAGAAAATAGAGTCACACGTGCCTGCCCCTTTTATAAGAAAATCCCAGGGACAACCTTCACTGTTGATGCTTTTCGTTATGGGTGTGTTGAAGGGTGCTCAGCGTATTTTCTTAGTCATTTCCATTGCGATCACTATGGTGGCCTTAGTAAGAAATGGTCACATGGCCCTATTTATTGCTCTCCTCTCACGGGACGGCTGGTTCAAATGTGTCTCTCGGTAAATCCTTTGTACATCTACCCTTTGGAATTTAACACTAAACATGTGATTGATGGCATCAAAGTGACTTTGTTAGAAGCCAATCATTGCCCTGGTGCAGCTTTGATTCACTTCGACCTCCCAAATGGGCAATCTTATTTGCACACTGGGGACTTTAGAGCTTGTAAACAAATGCGGACTTATGATCTTCTAGTAAATAAACGTGTGAATGTACTTTATTTGGATACCACATATTGCAACCCAAAATACCAGTTCCCTTCCAAGGAAGATGTACTTAATTATGTTGTCAAAATTACAAAGAACCACCTCAAAATGCATCCCAGAACTTTAGTGGTTGTTGGGGCATATAGTATTGGCAAAGAATGTGTATATCTAGCAATTTCTAAGGCACTCGGGGTAAAAATTTATGCTAATGCTTCAAGAAGACGGATTTTGCTAGCTTTTGGTTGGCGGGACTTTCCAGATAGACTCTGTACCAATGGAAATAACACACTTCTCCATATTCTGCCCATGTCATCTCTGAGATTTGAGACCTTAAAGGAATACTTGAAGACCTACAAGGAACAATTCTCAGCAATATTAGCATTCCGTCCAACAGGTTGGACTTTCAATGAGAAGATACGCAACGATCTGGAACTAATTAAGCCTGTTTCCAAAGGAAATATCACGATATATGGGGTTCCTTACAGTGAGCACTCCAGCTTCACAGAACTGCGAGATTTTGTTCAGTTTTTGAGGCCTGACAAGATAATTCCTACTGTGAATGTCGGGAACGCTGCTAATCGAGAAAAGATGCAATCTTACTTCCGAGACTGGTTGAAGGGCTAG 1554 0.4408 MPLSTTASSPSALEEGCLPHDGDGYELNDDGASCDVVSLDEEGFPSQVPGEDGSPNRSSEKSSFAADFYHCGTDWSSLSLLPEHRDLARDSGKKLKQANLFQIWGFERNGAVSSVESEPNQSGYRDEGGEGSAFQKRKIGKPGNWGSILRDTGKAFENPKSSRKRKDTPGENRVTRACPFYKKIPGTTFTVDAFRYGCVEGCSAYFLSHFHCDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIYPLEFNTKHVIDGIKVTLLEANHCPGAALIHFDLPNGQSYLHTGDFRACKQMRTYDLLVNKRVNVLYLDTTYCNPKYQFPSKEDVLNYVVKITKNHLKMHPRTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRILLAFGWRDFPDRLCTNGNNTLLHILPMSSLRFETLKEYLKTYKEQFSAILAFRPTGWTFNEKIRNDLELIKPVSKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFRDWLKG* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02431 517 CDD SNM1A-1C-like_MBL-fold 166 323 - -
Rops8g02431 517 FunFam DNA cross-link repair 1A 326 474 - -
Rops8g02431 517 MobiDBLite consensus disorder prediction 156 172 - -
Rops8g02431 517 Pfam DNA repair metallo-beta-lactamase 398 500 IPR011084 -
Rops8g02431 517 SUPERFAMILY Metallo-hydrolase/oxidoreductase 200 510 IPR036866 -
Rops8g02431 517 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 174 508 - -
Rops8g02431 517 Gene3D - 184 496 IPR036866 -
Rops8g02431 517 FunFam DNA cross-link repair 1A 184 348 - -
Rops8g02431 517 MobiDBLite consensus disorder prediction 112 172 - -
Rops8g02431 517 Gene3D - 326 474 - -
Rops8g02431 517 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02431 Rops-Chr8 56061803 56065637 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02431 K15340 - gmx:100790844 843.958