Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02425 ATGTCTTCTGTGCCAGCACGAACGGGGCGAGAAAGACAGCGTTATGAAGACAACCTACGCCTTGTTTCTGGATGTATTCCCTATAGATTGAGAAAGGACAACACAGATCAAAGGGGGGAAACTGAGGAAATAATAGAAGTAATTATGCTTTCTTCACCAAAACGTGATGACCTTGTATTTCCAAAGGGTGGATGGGAGGATGATGAGACAGTTACAGAAGCTGCTTGCCGTGAAGCTTTAGAAGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGTCAGGACTTATGTAACATGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTTGACACTTGGCCAGAGCAGAAAAACCGTGCTCGCCAATGGTTAAACATAAAAGAGGCGTTTAGACTCAGTCGATATGACTGGATGTGTAATGCACTGGAGGAGTTTTTGAGAGTTATGGCAGAGGACAGAAAGCTTAAGAAGCAAGATGAGAATGTTGATTCCCCTTCAATTCTAGTAGCAGATGTGTCAGAATGCCAAAGCATGTCACCTAACTGCTATAAAAGATCCTCTACTATTCAGCACCATGGTATGCCATCTAAAGCCAATCTCCTGTCACGTGCTTCTCAAGAGATAGCCATCCACTTTGGTTATTGA 696 0.4325 MSSVPARTGRERQRYEDNLRLVSGCIPYRLRKDNTDQRGETEEIIEVIMLSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSSQDLCNMEGGCRGYMFALEVTEELDTWPEQKNRARQWLNIKEAFRLSRYDWMCNALEEFLRVMAEDRKLKKQDENVDSPSILVADVSECQSMSPNCYKRSSTIQHHGMPSKANLLSRASQEIAIHFGY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02425 231 FunFam Nudix hydrolase 13 mitochondrial 4 165 - -
Rops8g02425 231 Pfam NUDIX domain 52 154 IPR000086 -
Rops8g02425 231 SUPERFAMILY Nudix 13 175 IPR015797 -
Rops8g02425 231 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Rops8g02425 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 165 - -
Rops8g02425 231 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Rops8g02425 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 169 - -
Rops8g02425 231 CDD Nudix_Hydrolase_9 21 155 IPR047198 GO:0016462
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02425 Rops-Chr8 55971981 55977253 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02425 K07766 - gmx:100794003 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02425 8 55971981 55977253 Rops8g02425 8 55971981 55977253 ECH