Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02418 ATGCAAGGAGATGAGTGCTTCCTGTGTCACCAAATAGGGCACTGGTCTAGGTATTGCCCTTTGAAATCCCCCAACAACAAACCTGACCTTGTGAAACGAATGCAAGGAGAGGAGTGCTTCCTGTGTCACCAAATAGGGCATTGGTCTTGGTATTGCCCTTTGAAATCCCCCAACAACAAACCTGACCTTGTGAAACGAATGCAAGGAGAGGAGTGCTTCCTGTGTCACCAAATAGGGCATTGGTCTTGGTATTGCCCTTTGAAATCCCCCAACAACAAACCTGACCTTGTGAAACGAATGCAAGGAGAGGAGTGCTTCCTGTGTCACCAAATAGGGCATTGGTCTTGGTATTGCCCTTCCAAATCCCCCAACAACAACAAAAACAAATCCCTCTCACCTTCCTCACCCTCAACCAATAACTCTTCCCTTAAGATGATACGGTGTCGTTGTGGTCATGGTTTTTGCGATATCAAAACCTCCTTCACTAACAGCAAGTACTATACTTGTCCCATTAAAAGGGGGGCAAAATGTAAAGACTTTGTTAAATGCTGCAATGATCCCATAGATGAGAGTGATTTGCAGCCTCCACAGTTGAAGTATCCAGAGTGTGCATGTGGAGCTGGAGTGTGTCGAAGCGTGAAGGGAACATCAGAGAACCCAAATGCTGTTAAGTACTATTTTGTGTGCCCTGTTAAGAAGGATCATGGATCTTGTGGATACCAAGTGTCGGAAGATGAACTGCTCAATAACAAAAGCATTGTTCCTATCCGGCAAAGCAGGCAAAGATCTCTCCATGACTTTTGGGAGGGCTCCCAAAATGATAAAACTGACAATGACCTAGGCAATGAGTTGGGTGAGGAAGGTGGTTTACTAGTACAGACCAAAAGGGTGAAAATAAGTGACAATTCTGAAAATTCCTCATCAATGGCTGGATCTGAGATTCCAGAGGTAGAAGATGGAGGATCTGCAACAAAGGCGACCAATTCAAAATCTGTTGGTTTTCCAGGATTTGGGATTGCTGATGATGATCTAGAAGTCGCCAACTCAGTGTCAAGGGAGGCTATTGAAGAAAGAGCTGTTCTATTATCTTCTCTGTCAACACGTTCAAGGATCCATCGTCGACAGAGTGTATTTCAGAGGCTCATTTTCGCTGATGAATCACTTGTTGCAGCTTCTTGTCCTACTGGCATTTTTCCATCATTTAATCCTATTGTCGTTCCTAAACAAGAAAGTATTCCTAATGGTCATTCTGAATCCAACAACCTTGCTAGCAACAGTCTCAGTCAACATACCCAACTTTCAACTGTTTGCCATACTGAGGTTTCTAGAGATTTACTTAGTCCCAATAAATCACCAGGCAATAAAAACAAGCCAATGTCAAAGGCACAAAGGCATAGAGAGGTGGCCTTATTCACACAGCAGCGGCTTCTTATTGATCTAGAGACTTGGGATCCTCGTGAGCATGAATCTATGAGAGAGGCAGCAGACACCACTTTTGCTGTGTTAAATCTTTTGGGTGTTAATTTTAAACAATTTTCTGATCATGTAATGGACTTCATCAATATTGCATCATCAATCGCAGAAATGGATAAGTCCATGGAAAGTTCCCTTACGCTGGAGGAACTCAATGAACTCTTTGAGGAAGAGAAAGTGAGATTGGCTCACATTCAGGATAACTATGTCAAGATTGAGGCTTCGCTTAAAATATCTCAGCAACATAGACAATCACTTTGTGAACAGGCATCCTTTGCTTACTTCCATGAGGAGATATGTAGATACAGAACTTCATTCCTAAGGCCTTGA 1803 0.4293 MQGDECFLCHQIGHWSRYCPLKSPNNKPDLVKRMQGEECFLCHQIGHWSWYCPLKSPNNKPDLVKRMQGEECFLCHQIGHWSWYCPLKSPNNKPDLVKRMQGEECFLCHQIGHWSWYCPSKSPNNNKNKSLSPSSPSTNNSSLKMIRCRCGHGFCDIKTSFTNSKYYTCPIKRGAKCKDFVKCCNDPIDESDLQPPQLKYPECACGAGVCRSVKGTSENPNAVKYYFVCPVKKDHGSCGYQVSEDELLNNKSIVPIRQSRQRSLHDFWEGSQNDKTDNDLGNELGEEGGLLVQTKRVKISDNSENSSSMAGSEIPEVEDGGSATKATNSKSVGFPGFGIADDDLEVANSVSREAIEERAVLLSSLSTRSRIHRRQSVFQRLIFADESLVAASCPTGIFPSFNPIVVPKQESIPNGHSESNNLASNSLSQHTQLSTVCHTEVSRDLLSPNKSPGNKNKPMSKAQRHREVALFTQQRLLIDLETWDPREHESMREAADTTFAVLNLLGVNFKQFSDHVMDFINIASSIAEMDKSMESSLTLEELNELFEEEKVRLAHIQDNYVKIEASLKISQQHRQSLCEQASFAYFHEEICRYRTSFLRP* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02418 600 SUPERFAMILY Retrovirus zinc finger-like domains 66 90 IPR036875 GO:0003676|GO:0008270
Rops8g02418 600 PANTHER OS07G0190500 PROTEIN 197 581 - -
Rops8g02418 600 Gene3D - 65 135 - -
Rops8g02418 600 Gene3D - 1 64 - -
Rops8g02418 600 SMART c2hcfinal6 38 54 IPR001878 GO:0003676|GO:0008270
Rops8g02418 600 SMART c2hcfinal6 71 87 IPR001878 GO:0003676|GO:0008270
Rops8g02418 600 SMART c2hcfinal6 104 120 IPR001878 GO:0003676|GO:0008270
Rops8g02418 600 SMART c2hcfinal6 5 21 IPR001878 GO:0003676|GO:0008270
Rops8g02418 600 SUPERFAMILY Retrovirus zinc finger-like domains 99 126 IPR036875 GO:0003676|GO:0008270
Rops8g02418 600 MobiDBLite consensus disorder prediction 444 465 - -
Rops8g02418 600 SUPERFAMILY Retrovirus zinc finger-like domains 4 55 IPR036875 GO:0003676|GO:0008270
Rops8g02418 600 ProSiteProfiles Zinc finger CCHC-type profile. 6 20 IPR001878 GO:0003676|GO:0008270
Rops8g02418 600 Coils Coil 539 559 - -
Rops8g02418 600 MobiDBLite consensus disorder prediction 300 332 - -
Rops8g02418 600 MobiDBLite consensus disorder prediction 444 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02418 Rops-Chr8 55860841 55865902 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02418 - - vra:106766599 469.544