Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02409 ATGTGGCGAAGCACCCAAGGATCTCTTCAGTCTTTATGTTGGGGTTCTTCATCTTTTGGTGGAATTGTGAGCTCCTACTTCAGTGGGTCTTTGCTGCATACATATGGAGTAAAGTTTGTTTTTGGTATCAAAGCACTGCTTCCACTGATAACATCAACAATTGCCGTTCTTGCAAAAGAACAACCTATGCTTGGTACAACTAGAGGGCAAAATCTTCCTTTTGCTAGGCCTGGGATTTTGGAAAGTTCAAAACACAGCATTATTCAGGTAGGCTCCTTCCTGGATAGTGTAAAATGGGATAATAAAGGTTTGGCTGTGGCAATAGCTCAGAATGTTGACACTGGAGCCGTACTAATGCAAGGCTTTGCAAACAGAGAAGCAGTGGTTACAACCATATCTTCTCGCAAGGCCACATTCTATAGCCGGTCACGATCAACATTGTGGACCAAAGGAGAGACCTCTAATAATTTTATCAACGTTCATGATGTCTTTCTTGATTGTGATCGGGATTCTATAATATACCTTGGGAAACCTGATGGGCCTACCTGCCACACAGGTTCAGAAACATGCTATTATACATCAGTCTTTGACTTGTTAAAAGAGCAAGAGGCTGAAGGAAATAAATTGGCATTAACCTCTTTATATGCGTTAGAGTCAACAATCTCCCAGCGCAAAGCAGAGTTAGCAGAAGGAGAAAATGGAAAGCCTTCATGGACAAAGAAATTATTGCTTAATGATAAGTTGCTGTGCTCTAAAATCAGGGAAGAGGCAAATGAGTTGTGTCAAACATTAGAGAATAATGAGGACAAGTCACGTACTGCCTCAGAGATGGCTGATGTACTTTATCATGCCATGGTTCTGTTGGCACTGAAAGATGTCAAAGTAGAAGATGTTTTGCAGGTTCTTCGGCAGAGATTTTCCCAATCTGGTATTGAGGAAAAGAGAAGTCGTGCATCAAAGAAACCAGTGGAAGAGTGA 978 0.4151 MWRSTQGSLQSLCWGSSSFGGIVSSYFSGSLLHTYGVKFVFGIKALLPLITSTIAVLAKEQPMLGTTRGQNLPFARPGILESSKHSIIQVGSFLDSVKWDNKGLAVAIAQNVDTGAVLMQGFANREAVVTTISSRKATFYSRSRSTLWTKGETSNNFINVHDVFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVFDLLKEQEAEGNKLALTSLYALESTISQRKAELAEGENGKPSWTKKLLLNDKLLCSKIREEANELCQTLENNEDKSRTASEMADVLYHAMVLLALKDVKVEDVLQVLRQRFSQSGIEEKRSRASKKPVEE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02409 325 FunFam Histidine biosynthesis bifunctional protein HisIE 89 183 - -
Rops8g02409 325 CDD NTP-PPase_HisIE_like 214 302 IPR008179 GO:0000105|GO:0004636
Rops8g02409 325 Gene3D - 211 307 - -
Rops8g02409 325 Hamap Histidine biosynthesis bifunctional protein HisIE [hisI]. 95 307 IPR023019 GO:0000105|GO:0004635|GO:0004636
Rops8g02409 325 SUPERFAMILY HisI-like 94 196 IPR038019 -
Rops8g02409 325 Gene3D - 85 183 IPR038019 -
Rops8g02409 325 Coils Coil 250 274 - -
Rops8g02409 325 SUPERFAMILY all-alpha NTP pyrophosphatases 215 306 - -
Rops8g02409 325 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 84 317 - -
Rops8g02409 325 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 235 305 IPR021130 -
Rops8g02409 325 NCBIfam phosphoribosyl-ATP diphosphatase 214 302 IPR008179 GO:0000105|GO:0004636
Rops8g02409 325 Pfam Phosphoribosyl-AMP cyclohydrolase 119 192 IPR002496 GO:0000105|GO:0004635
Rops8g02409 325 Pfam BT1 family 5 54 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02409 Rops-Chr8 55747239 55752342 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02409 K11755 - gmx:100807276 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02409 8 55747239 55752342 Rops8g02409 8 55747239 55752342 ECH