Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02391 ATGACCAACACTGCGGTGCTATTCGCCGTTTTGGTGGCATCAATTTGGTTTGTGGAATCAGAGTACATAGAGTACAACACCACGCAGAGGATCGTCCCTGACAAAATAAACGTGCACTTGGTACCTCACTCCCACGATGATGTTGGCTGGCTCAAGACCGTCGATCAGTACTACGTTGGAGCCAACAATTCCATTCGGGGTGCATGTGTGCAGAACGTGCTGGATTCTGTTATATCCGGGCTGTTGGAAGATAAGAATCGCAAGTTTATCTATGTTGAGATTGCATTTTTCCAAAGATGGTGGAGACAGCAAAGTAAAGCTATGAAAATTGAAGTCAAGGAGCTTGTCAACTCGGGTCAGCTGGAATTCATAAATGGGGGTATGTGTATGCATGATGAGGCCACCCCGCATTACATTGACCTAATTGATCAGACCACTCTTGGGCATCAATTCATCAAAGAGGAATTTGGTAAGATTCCAAGAGTTGGCTGGCAGATTGATCCATTCGGCCATTCTGCAGTTCAGGCTTACTTGCTTGGCGCTGAGCTAGGATTCGATTCACTCTTTTTTGCTAGAATTGATTACCAAGATAGAGCCAAGAGGTTAAAGGAGAAAACTCTAGAGGTTGTTTGGCAGGGTTCCAAGTCTCTTGGTTCTTCTTCACAAATATTCACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGTTTCACGTTTGAGATAAATGATGTTTCTCCTCCAATTCAGGATGACATTCTACTGTTTGACTACAACGTTGAAGAAAGAGTCAATGACTTTGTATCTGCTGCCTTAGCTCAGGCTAATGTGACCAGAACAAATCACATTATGTGGTTAATGGGGACTGACTTCCGTTATCAATATGCTAATTCATGGTTCAGGCAGATGGATAAGTTTATTCACTACGTCAATCAGGATGGGCGTGTCAATGCATTATATTCAACACCATCTATCTACACTGATGTGAAATATGCAGCTAATGAGCAATGGCCTCTTAAAATTGATGATTTCTTCCCGTATGCAGATCACCCAAATGCATATTGGACTGGTTATTTTACAAGTAGGTCAGCTTTAAAGGGTTATGTGAGAGTGATGAGTGGTTACTATCAGGCAGCAAGGCAGTTGGAATTTTTTAAAGGGAGGAATGCATCAGGACCACATACTGATGCATTAGCTGATGCTTTAGCAATTGCTCAGCACCATGATGCTGTTAGTGGCACAGAAAGACAGCATGTTGCTGCTGATTATGCAATGCGACTCTCAATGGGCTATGCAAAGGCAGAAAGATTGGTTGCATCTGCACTTGCTCTCTTGGTAAACCAAAGGTTAAGTTCGCATGGGATGAACCCAGTGACAGATTTCCAGCAGTGTCCTCTTCTTAATATAAGCTACTGTCCTCCGTCAGAAGCTATGTTGGGTAATGGAAAAACCTTGGTGATCGTTATTTATAATCCTCTTGCTTGGAAGAGGGAGGAAGTAATTCGAATTCCTGTTTCCACTGGGGAGGTTATTGTCCAGGATTCTGCTGGGAAGGAAATTGAGTCTCAGCTTCTGCCTCTATCTAATTCTACGTTGAGCATAAGAAACAATTATGTCAAAGCATATATAGGAAAAGCTCCTGCTGGGGAAGTCAAGTATTGGCTTGCGTTTCCGGTGTCTGTACCTCCCCTTGGTTTCAGCACCTACATGGTGTCAAGGCCTAAACAGACAGGTCATAGTTCAACCATCTCAAAGGTGTATAAATCAGAAGGAAGTACAAATAATAGCATAGAAGTTGGACAAGGGAATCTAAAGCTACTTTATTCTGCAGATGAAGGAAAACTAACTCATTTTGTTAACAGTAGAAATCTGGTTACAGCATCAGTTGAACAATCATACAGTTATTATTCTGGAAACGATGGGACTGATAAAGATCCTCAGGCATCTGGGGCATATGTCTTCCGTCCAAATGGCTCATTTCCCATTAAATCTGATCATCAGGTATCTTTTACTGTCCTTCGTGGTCCAATATTGGATGAAGTACATCAACAGCTCAATCCATGGGAATCTCAGATTATGAGAATATATAAGGCAAAGGAGCATGCTGAAGTTGAGTTCACAATAGGGCCCATACCTGTGGATGATGGCATTGGGAAAGAAATCATTACTCAATTTACAACTACAATGAAGACCAACAAGACATTCTACACAGACTCTAATGGGCGCGACTTCATTAAAAGGATTCGAGATTTCAGGACAGACTGGGATCTACAAGTGAACCAACCCATTGCTGGAAACTATTACCCAGTTAATTTAGGAATGTACATGCAAGATAGTAGTATGGAACTGTCAGTGTTGGTGGACCGCTCAGTTGGGGGTTCCAGCTTGGTCGATGGTCAGATAGAGCTGATGCTCCACAGGAGGTTGCTTCATGATGATGCAAGGGGTGTTGGTGAGGCACTCAATGAAACAGTTTGCATTGCTGATAAGTGTGAAGGTTTAACTATTCAAGGAAAACTGTACCTTAGAATTGACCGTATAGGTGAAGGTGCTAAATGGCGACGTACAGTTGGCCAGGAATTATATTCACCATTGCTGTTGGCCTTCACAGAACAGGATGGGGATAATTGGTTGCATTTCCAGCCATCAACATTTTCTGGCATTGATTCTTCCTACAGTTTACCAAACAACACTGCTCTTTTAACCCTCGAGGAATTTGGAAACAGAAAAGTACTCATAAGATTGGCTCACCTTTATGAGATTGGAGAGGACAAAGATTACTCAGTGATGGCAAGTGTGGAATTGAAAAAACTGTTTCCTAACAAGAAGATAAGTAAAGTGACGGAAATGAGTTTGTCCGCTAATCAAGAAAGAGCTGAAATGGAAAAGAAGAAATTAGTGTGGAAGGTAGAAGGCTCCACTGAAGAACCTAAGCTGGCAAGGGGAGGACCTGTTGATCCAACAAAACTGGTGGTTGAACTTGCTCCAATGGAGATTAGGACATTCTTCATTGACTTTGATCCTCTCCAAACAGTTTCTGCAGCAGAAAATCATGTAGCAATGTGA 3066 0.4227 MTNTAVLFAVLVASIWFVESEYIEYNTTQRIVPDKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISGLLEDKNRKFIYVEIAFFQRWWRQQSKAMKIEVKELVNSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKEEFGKIPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEVVWQGSKSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDILLFDYNVEERVNDFVSAALAQANVTRTNHIMWLMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDVKYAANEQWPLKIDDFFPYADHPNAYWTGYFTSRSALKGYVRVMSGYYQAARQLEFFKGRNASGPHTDALADALAIAQHHDAVSGTERQHVAADYAMRLSMGYAKAERLVASALALLVNQRLSSHGMNPVTDFQQCPLLNISYCPPSEAMLGNGKTLVIVIYNPLAWKREEVIRIPVSTGEVIVQDSAGKEIESQLLPLSNSTLSIRNNYVKAYIGKAPAGEVKYWLAFPVSVPPLGFSTYMVSRPKQTGHSSTISKVYKSEGSTNNSIEVGQGNLKLLYSADEGKLTHFVNSRNLVTASVEQSYSYYSGNDGTDKDPQASGAYVFRPNGSFPIKSDHQVSFTVLRGPILDEVHQQLNPWESQIMRIYKAKEHAEVEFTIGPIPVDDGIGKEIITQFTTTMKTNKTFYTDSNGRDFIKRIRDFRTDWDLQVNQPIAGNYYPVNLGMYMQDSSMELSVLVDRSVGGSSLVDGQIELMLHRRLLHDDARGVGEALNETVCIADKCEGLTIQGKLYLRIDRIGEGAKWRRTVGQELYSPLLLAFTEQDGDNWLHFQPSTFSGIDSSYSLPNNTALLTLEEFGNRKVLIRLAHLYEIGEDKDYSVMASVELKKLFPNKKISKVTEMSLSANQERAEMEKKKLVWKVEGSTEEPKLARGGPVDPTKLVVELAPMEIRTFFIDFDPLQTVSAAENHVAM* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02391 1021 Gene3D - 474 599 IPR013780 -
Rops8g02391 1021 SUPERFAMILY Families 57/38 glycoside transferase middle domain 353 448 IPR028995 -
Rops8g02391 1021 FunFam Alpha-mannosidase 396 451 - -
Rops8g02391 1021 FunFam Alpha-mannosidase 315 395 - -
Rops8g02391 1021 Pfam Glycosyl hydrolases family 38 C-terminal domain 601 815 IPR011682 GO:0004559|GO:0006013
Rops8g02391 1021 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 348 IPR000602 GO:0004559|GO:0006013
Rops8g02391 1021 Gene3D - 600 863 - -
Rops8g02391 1021 FunFam Alpha-mannosidase 36 316 - -
Rops8g02391 1021 Pfam Alpha mannosidase middle domain 353 445 IPR015341 GO:0004559|GO:0006013
Rops8g02391 1021 Gene3D Glycoside hydrolase family 38, central domain 396 450 IPR037094 GO:0004559|GO:0006013
Rops8g02391 1021 SMART Alpha_mann_mid_2 353 427 IPR015341 GO:0004559|GO:0006013
Rops8g02391 1021 SUPERFAMILY Galactose mutarotase-like 451 1006 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops8g02391 1021 Gene3D Glycoside hydrolase family 38, central domain 317 395 IPR037094 GO:0004559|GO:0006013
Rops8g02391 1021 Gene3D - 883 1008 - -
Rops8g02391 1021 FunFam Alpha-mannosidase 598 863 - -
Rops8g02391 1021 SUPERFAMILY Glycoside hydrolase/deacetylase 25 351 IPR011330 GO:0005975
Rops8g02391 1021 FunFam Alpha-mannosidase 473 598 - -
Rops8g02391 1021 CDD GH38N_AMII_LAM_like 36 312 - -
Rops8g02391 1021 PANTHER ALPHA-MANNOSIDASE 9 1006 - -
Rops8g02391 1021 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 898 1003 IPR041147 -
Rops8g02391 1021 Gene3D Glycoside hydrolase 38, N terminal domain 36 316 IPR027291 -
Rops8g02391 1021 FunFam Alpha-mannosidase 883 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02391 Rops-Chr8 55315759 55334660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02391 7 946 Glycoside Hydrolase AT3G26720 74.601 0.0 1490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02391 K01191 - gmx:100795651 1848.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02391 8 55315759 55334660 Rops8g02391 8 55315759 55334660 ECH