Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02387 ATGAGACAACACAAGCTTGTATCTTCTCTGAGCAACAATAACCGGCAACCGAGGATTCTGTATCTGGTGTGTGCCGCTGCATTGTTCTCCCTCCTCCTCTTCGCTATCCAATCCTCTTTCTTCTCTGGTTCCTTCTATTCAGATCGCAACTCCTACGAAATTCGTGTCTTGTCTCAATTTCAGTCCAGTGTTCAACAATGTGTGGATAATAGGGGGCTTGGACTCACTGCGCATATTGTTGACCATTGTAAATTGATCCTTAAATACCCTGAAGGTACCAACAGCACTTGGTACAATATACAGTTTAAAAAATTTGAGTCTTTGGAGTACCATTATGATGTGTGTGAGTCAATCCTCTTGTGGGAACAGTACCGTAGCATGACAACAGTGTTGACCAGAGAGTATCTTGATGCTCGTCCTGGTGGGTGGGAAGATTATGCTCCCAAAAGGATAGCACAATTGGGGACAAAGAAGTGCTCTAATAGGACTCTTTGTGAAGAGAACCTTAATATATTATTACCTGCAAAACCCCCCTTTCATCCACGGCAGTTTCGTACTTGTGCTGTTGTTGGTAATTCTGGGGACCTTTTGAAGACAGAATTTGGGAAAGAAATTGATAGTCACGATGCTGTTTTTCGAGACAATGAGGCTCCTGTTAATCAGAAATATGCCAAGCATGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTGCTGCTCGTAACATGGTCCCTATTCTAAATGGGTCTGATGGCGAGGTACTCATAATCAAAAGTATGACACATAGAGAAATCAATGCGGTTATAAAGACTATACCAAATCCAGTGTATCTCTTCCAAGGTATTGTACTGCGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAGTTAGCACTCTCCATGTGTGATATTGTTGATATGTATGGTTTCACTGTTGATCCAGGATACACTGAATGGACAAGGTACTTCTCGGCTCCTAGGAAGGGACACAATCCACTTCAAGGAAGAGCATACTACCAACTTCTAGAATGTCTTGGGGTAATCAGGATTCACTCCCCCATGAGATCTGAAAGGAGGCAAGATTGGTCAGATGTGCCAAGTAGAGAAATGATAAGCCAAGCACATGCAGCAGCTTTGCGCTTGAAAAAGAGTCAAGCTGATTTAGGGCAGTTTGGCAATTGTAAGGTGTGGGGCAATGTGGACCCAGACAAAACTGGACCTATTTCAGGATCCCCAGACATGAGTGATGTCAGGAAGTTTTCAAATTATAGTAAATGGGAAGTCATGCCTTTGGAGAGTTTGAGGAAAGAAGCACAAGATCACTATAGCCAGATGCAAGGGGCCTCTCTATATAAAATGGATGGCAATAGGTTGGATGATCTAGTGTGTGTCAGACATTCCTTGAAATCTGAGGTGTAA 1425 0.4295 MRQHKLVSSLSNNNRQPRILYLVCAAALFSLLLFAIQSSFFSGSFYSDRNSYEIRVLSQFQSSVQQCVDNRGLGLTAHIVDHCKLILKYPEGTNSTWYNIQFKKFESLEYHYDVCESILLWEQYRSMTTVLTREYLDARPGGWEDYAPKRIAQLGTKKCSNRTLCEENLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGKEIDSHDAVFRDNEAPVNQKYAKHVGLKRDFRLVVRGAARNMVPILNGSDGEVLIIKSMTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDMYGFTVDPGYTEWTRYFSAPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSERRQDWSDVPSREMISQAHAAALRLKKSQADLGQFGNCKVWGNVDPDKTGPISGSPDMSDVRKFSNYSKWEVMPLESLRKEAQDHYSQMQGASLYKMDGNRLDDLVCVRHSLKSEV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02387 474 Gene3D Glycosyl transferase family 29 144 276 IPR038578 -
Rops8g02387 474 Gene3D Glycosyl transferase family 29 277 355 IPR038578 -
Rops8g02387 474 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 11 473 IPR044782 GO:0008373|GO:0009846|GO:0009860
Rops8g02387 474 Pfam Glycosyltransferase family 29 (sialyltransferase) 173 240 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02387 Rops-Chr8 55257972 55265951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02387 70 349 Glycosyltransferase AT1G08660 85.357 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02387 - - gmx:100527382 852.432