Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02381 ATGAGTAGTTGGAAGAGTCTTCTTCTACGAATTGGTGACAAGAGTCCCGAATATGGAGCCTCCTCCGAATTCAAAGACCACATTGAAACTTGCTTTGGTGCACTTCGCAGAGAGCTCGACCACTCCCAAACTGAGATTTTGGAGTTCCTTCTCTCATGTGCTGAGCAATTGCCTCACAAGATTCCTTTCTATGGAACCCTGATTGGCTTGATTAACTTGGAAAATGAGGACTTTGTGAAAAAGCTAGTGGAGAAAACTCAAACTAAACTTCAGGATGCCATAGATACTGGAAACTGCAATGGGGTTCGAATTCTAATGCGGCTTATGACTGTCATGATGTCCAGTAAGGTTCTTCAACCAAGCTCTTTGGTGGATGTCTTCGAAACATTTTTATCATCAGCTGCCACAACAGTAGATGAGGAAAAAGGGAATCCCTTATGGCAGCCTTGTGCTGACTTTTACATAACTTGCATTTTATCATGCCTCCCGTGGGGTGGGGCAGAACTTCTTGAGCAAGATCCTGAAGATATTGAGAGAGTGATGGTTGGTGTAGAAGCTTACTTGAGCATCAGAAGGCATACTTCTGACACGGGTTTATCTGTTTTTGAGAATGATGATGAAATCGAGAGAGGTGTTAATAACAAGGATTTTTTGGAAGACTTGTGGGATAGAATACAGGCTTTATCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGACCTCATCTTTCATTTGAAGCTCAGCTGGTTGCTGGGAAGTCCCATGAATTTGGGCCAATAAACTGCCCCAACTTACCAAACCCGCCTTCAGTCCCTTCTGGCATATCTTTTGGTAAACAAAAGCATGAGGCGGAATTAAAATATCCTCAAAGGATACGCCGGCTAAACATATTTCCTTCCAGTAAAACTGAGGATCTACAGCCAATAGATCGATTTGTGATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTCAATGGCAGTCGAAAGGAATGTGCTTCTTTCATGGTTGGCATGCCAGTTTCCTTCAGATATGAGTACCTTATGGCTGAGACAATATTCTCTCAGCTGCTGATGCTACCGCAACCGCCTTTCAAACCAGTATATTACACGCTGGTTATAATTGACCTTTGTAAGGCTCTTCCAGGAGCTTTTCCTGCAGTTGTAGCTGGGGCAGTTCGTGCTCTCTTTGAGAAGATTGGTGATCTGGATATGGAGTGTCGGACACGTCTAATCCTTTGGTTCTCACACCATTTATCAAACTTTCAGTTCATCTGGCCATGGGAAGAGTGGGCTTATGTCTTAGACCTCCCGAGGTGGGCCCCTCAACGTGTCTTTGTTCAGGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGCATTGAAAATGCACCTGGTTTAGAAGAATTGCTTCCTCCAAAGGGTGGACCGAACTTCAGTTTGGGTGCAGAAGATGGTAAAGAAAACAATGAACATGTGTTGTCTGGAGAGCTCAACAACATGGTTAAAGGGAAGGCACCCGTCCGTGAAATAATCTCATGGATTGATGAAAGTGTGTTTCCAAATAATGGTCTAGAAGTTACTCTCAGAGTTGTCATACAAACTCTTCTTAATATTGGATCCAAAAGTTTCACTCATTTGATAACTGTGTTAGAGAGATATGGGCAAGTCATTGCAAAAATATGTCCTGACCAGGATAAGCAATTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAACACCCAAATGACAGCAATAGCAATTGACAGGATGATGGGTTATCGACTTGTATCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGGAGAAAATACTGAGCAATTTCATACATCGGATCGTCCTTGGGAGATTCTTAGAAATGCAGTAAGCAAGACATATAATCGCAATTCTGATCTAAAAAAAGAGATATTGGCTCTTAAAAAAAACATTTCATCAGCTGAAAAAGCTGCCAAGGAGGCAAAAGCTGAGTTAGATGCTGCTGAGTCAAAACTAACACTCGTGGATGGTGAACCAGTTCTTGGTGAAAATCCTGTTAGGTTAAATAGATTGAAATCACATGCTGAAAAAGCAAAGGAGGAGGTAGTGTCTCTTCAAGAATCTTTAGAAGCTAAGGAAGCTCTTCTTGCCCGAGCAACTGATGAAAATGAGGCATTGTTTCTCTTATTGTACAAAAGCTTCCTAAATGTATTGATGGAGCGTCTTCCCAAGGGATCTGGAGCTAGAACACTGAGTGAATTGAAGTCTGCACAAGTCGATGGGATGGCAGTGGACCCTGAGGAACCATCATCAATGGAATTAGACAATGAGAATCAGGGACCTCAAAACAGTGAGTCAAATGGTGGGAAGAAAAGCGGTGCTTATAATGTAGGTGAAAAGGAGCAATGGTGTATCACCACTTTGGGCTATTTGAAGGCCTTTTCTAGGCAGTACGCTGCTGAGATATGGCCCGTTATTGAAAAGTTGGATGCAGAGGTATTGACAGAAGATGCACCTCCTCTTTTTCGGTCGGCTGTTTATTCTGGTCTTCGAAGATCAATTAATGAGGCTTGA 2595 0.4258 MSSWKSLLLRIGDKSPEYGASSEFKDHIETCFGALRRELDHSQTEILEFLLSCAEQLPHKIPFYGTLIGLINLENEDFVKKLVEKTQTKLQDAIDTGNCNGVRILMRLMTVMMSSKVLQPSSLVDVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELLEQDPEDIERVMVGVEAYLSIRRHTSDTGLSVFENDDEIERGVNNKDFLEDLWDRIQALSSNGWKVESVPRPHLSFEAQLVAGKSHEFGPINCPNLPNPPSVPSGISFGKQKHEAELKYPQRIRRLNIFPSSKTEDLQPIDRFVMEEYLLDVLLFFNGSRKECASFMVGMPVSFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIGDLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPNFSLGAEDGKENNEHVLSGELNNMVKGKAPVREIISWIDESVFPNNGLEVTLRVVIQTLLNIGSKSFTHLITVLERYGQVIAKICPDQDKQFMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSGENTEQFHTSDRPWEILRNAVSKTYNRNSDLKKEILALKKNISSAEKAAKEAKAELDAAESKLTLVDGEPVLGENPVRLNRLKSHAEKAKEEVVSLQESLEAKEALLARATDENEALFLLLYKSFLNVLMERLPKGSGARTLSELKSAQVDGMAVDPEEPSSMELDNENQGPQNSESNGGKKSGAYNVGEKEQWCITTLGYLKAFSRQYAAEIWPVIEKLDAEVLTEDAPPLFRSAVYSGLRRSINEA* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02381 864 MobiDBLite consensus disorder prediction 780 798 - -
Rops8g02381 864 Coils Coil 695 729 - -
Rops8g02381 864 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Rops8g02381 864 Pfam MIF4G domain 21 192 IPR003890 GO:0003723|GO:0005515
Rops8g02381 864 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Rops8g02381 864 Gene3D - 296 481 - -
Rops8g02381 864 Pfam MIF4G like 343 467 IPR015172 GO:0016070
Rops8g02381 864 MobiDBLite consensus disorder prediction 764 801 - -
Rops8g02381 864 SUPERFAMILY ARM repeat 293 478 IPR016024 -
Rops8g02381 864 SUPERFAMILY ARM repeat 478 850 IPR016024 -
Rops8g02381 864 Gene3D - 490 854 - -
Rops8g02381 864 FunFam Nuclear cap-binding protein subunit 1 3 269 - -
Rops8g02381 864 Coils Coil 644 685 - -
Rops8g02381 864 PANTHER CAP BINDING PROTEIN 3 858 IPR027159 GO:0000339|GO:0005846|GO:0006406
Rops8g02381 864 FunFam Nuclear cap-binding protein 296 481 - -
Rops8g02381 864 Gene3D - 3 269 - -
Rops8g02381 864 Pfam MIF4G like 500 828 IPR015174 GO:0016070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02381 K12882 - gmx:100811738 1529.61