Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02370 ATGGCGGATCCAATCTGGAAGTCTCTGATTTCATTTGCGGTGATAGCTTCGTTGTTGGTTTGCTCACTCGCTTCCTCTGACGTACCGTTCATCGTCGCTCACAAGAAGGCATCACTCAACAGGCTCAAATCTGGTGCTGAAAGGGTATCTGTCACCATCGACATCTACAACCAAGGAACCTCGACTGCATACGATGTAAGTCTGGCGGATGATAGTTGGCCAAGTGATGTTTTCGATGTAATCAGCGGTAGCACTTCAAAGTCATGGGAAAAGCTTGATGCTGGTGGCATCCTCTCCCACACATTTGAGCTGGAGGCAAAAACGAAGGGAGTATTTTCTGGTGAACCAGCTGTCATAAAGTTCCGTGTCCCCACAAAGCCTGCTCTACAGGAGGCATATTCATCTCCCATATTGCCTTTAGATGTTCTTGCTGATAGACCTCCAGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAAATATGGATCTCTAATCTCAGTGATCTCCATCATGGTTCTGTTTGTGTACCTTGTAGCTACACCATCAAAATCTGGTGCAAAAGGAAGCAAGAAGAAGCGTTAA 585 0.4615 MADPIWKSLISFAVIASLLVCSLASSDVPFIVAHKKASLNRLKSGAERVSVTIDIYNQGTSTAYDVSLADDSWPSDVFDVISGSTSKSWEKLDAGGILSHTFELEAKTKGVFSGEPAVIKFRVPTKPALQEAYSSPILPLDVLADRPPEKKFEWAKRLLAKYGSLISVISIMVLFVYLVATPSKSGAKGSKKKR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02370 194 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 12 193 - -
Rops8g02370 194 Pfam Translocon-associated protein beta (TRAPB) 16 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02370 Rops-Chr8 54935209 54937756 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02370 K13250 - gmx:100500066 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02370 8 54935209 54937756 Rops8g02370 8 54935209 54937756 ECH