Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02368 ATGGGGTGCACTTACTCTGTGTATAGGAAGAAGAAGTCAAGCTTTCCTGAAGTAGTGGTCTTAGCTCCATCAACAAGAATTCCAGTGCAATCTGATCTTCAAAGGATGCTTAAAGGGTTAATTCCAAGGGATCTTGCTGATAAATTGTCTTCACTTCGGAACCAGATTGTGTTGGTAGCAGAGGATACTGATGGATCAGCTATAGCTGAATTGCTGCGAGCTTTGAATGAGTACTTGTCTGTTCTGATTGGACTTACTAAGAAAGAGTATGGTCTTGAGGGACTGATAGAATTCAAGTGGAAAAATTTCAGCGATGGACGACAAGACAGTAGCATAGCGAATGCCTGGTTTGAGGTGTTATCTTCTGTTCACTTTATGGCTATGTTGACACTCTCGGAGGCTGACTCACTGATGATTCCAAAGGATCATTCAGGCTCTGGATTCAGGGTTGTATCTGCAGATAGCAAGAGGGAAGCAATTGATTTGTTACTCAAGGCATCAGGATACCTGGAGTTCTGTGTCAGAGATATTCTTACTCAGATACCTGCTGAAACCAAGAAAATTTTGCCCCACGATTTGCAAGAGGGTGTATTGGAGGCTATAGCTATTCAAGCACTAGGCCAGGGAACTGAGATTCAACTTGGTCTTGCGGTGGAAAGTCAGAAGGCAACTTTGTCAGTGAAGAGGAGGTTGGCATGTGAACAACTAATTTACTTTAGTCAGGCTTATCACTTGTTGTCAGGATGTGACTTCAACCAAGGTCATGGAAAGAAGCATATCCGGTTCATCAAATGGAAATTCCTTGAAGCCAAGGCTGCAGCTTACTACTACCATGGTCTGATCCTAGACAAGGGTAATGAACCAAGCAATCACATTGCTGCAGTGTCTTGTTTTCTTGCTGCAGAAGAACTTTTGTCTGAAAGCAAGAAAGCCTGCTTGAGTTTCTGTCTTGCAGCTCCAGTGACAAGGGTTGCTCCACTCTGGGGTGCTATGAAACATTTAACTCAGAAAATTCCTGAAGTTGCATCAAGAAAGTCCCAGATGTATGGCTACCTCTTGGAGCAAGAGAAGGGTCCCCAAGCATTGCCAGATCTACCTGAGTTCCAATTGTCATTACGTCCTGATGATTATGAACTGCCTGAAATTGATCCAGCATGGGATAGTACAAACTGGGAAACTCTAGGACAACCATTGAAAGAGCACCTTAGAGACAATGATGAGAATCCAACTGATTGA 1236 0.4337 MGCTYSVYRKKKSSFPEVVVLAPSTRIPVQSDLQRMLKGLIPRDLADKLSSLRNQIVLVAEDTDGSAIAELLRALNEYLSVLIGLTKKEYGLEGLIEFKWKNFSDGRQDSSIANAWFEVLSSVHFMAMLTLSEADSLMIPKDHSGSGFRVVSADSKREAIDLLLKASGYLEFCVRDILTQIPAETKKILPHDLQEGVLEAIAIQALGQGTEIQLGLAVESQKATLSVKRRLACEQLIYFSQAYHLLSGCDFNQGHGKKHIRFIKWKFLEAKAAAYYYHGLILDKGNEPSNHIAAVSCFLAAEELLSESKKACLSFCLAAPVTRVAPLWGAMKHLTQKIPEVASRKSQMYGYLLEQEKGPQALPDLPEFQLSLRPDDYELPEIDPAWDSTNWETLGQPLKEHLRDNDENPTD* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02368 411 Gene3D alix/aip1 like domains 39 395 IPR038499 -
Rops8g02368 411 Pfam BRO1-like domain 47 309 IPR004328 -
Rops8g02368 411 ProSiteProfiles BRO1 domain profile. 1 411 IPR004328 -
Rops8g02368 411 CDD BRO1_Alix_like 10 375 - -
Rops8g02368 411 PANTHER UNCHARACTERIZED 1 393 IPR038898 -
Rops8g02368 411 SMART BRO1_2 19 382 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02368 Rops-Chr8 54892413 54895646 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02368 - - gmx:100786306 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02368 8 54892413 54895646 Rops8g02368 8 54892413 54895646 ECH