Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02347 ATGCATTACCAAACTGCATCATGGGGGAGCTACATGGCACCAAGAAGTGCCATGGTGATGGGTGACCCAATGGAGCGTATAGAGAGGCTGGCATCAGAGAATGCAGTGGTGATATTCAGTGTGAGCACGTGCTGCATGTGCCATGCGATAAAGAGGTTGTTCTGTGGAATGGGAGTGAACCCAACGGTTCATGAGCTTGATGAGGATCCAAGAGGGAAGGACCTTGAAAGAGCCTTGATGAGGCTTCTGGGTACTTCCTCAGTGGTCCCTGTGGTCTTTATTGGTGGCAAGCTTGTGGGTACCATGGATAGAGTCATGGCTTGTCATATCAATGGCACTCTTGTCCCTCTCCTCAAAGAAGCTGGTGCTCTTTGGCTTTGA 381 0.5013 MHYQTASWGSYMAPRSAMVMGDPMERIERLASENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDLERALMRLLGTSSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02347 126 Pfam Glutaredoxin 36 99 IPR002109 -
Rops8g02347 126 ProSiteProfiles Glutaredoxin domain profile. 24 125 - -
Rops8g02347 126 CDD GRX_GRXh_1_2_like 35 117 - -
Rops8g02347 126 PANTHER GLUTAREDOXIN 24 126 IPR011905 -
Rops8g02347 126 FunFam Glutaredoxin family protein 24 125 - -
Rops8g02347 126 NCBIfam glutaredoxin-like family 27 126 IPR011905 -
Rops8g02347 126 SUPERFAMILY Thioredoxin-like 24 125 IPR036249 -
Rops8g02347 126 Gene3D Glutaredoxin 15 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02347 Rops-Chr8 54360355 54360735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02347 1 126 Miscellaneous Gene Families AT3G02000 63.971 1.06e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02347 K03676 - gmx:100808865 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02347 8 54360355 54360735 Rops8g02347 8 54360355 54360735 ECH