Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02298 ATGAAAGTTTACTATCTACCAATTTGTGAATTGAGGCACTTCGTCCCCAATTTAACTATTGGCGCTCCAGTCATTGAAAGTTTGAGAAAGCACACAAAGGCATATCTGGATTGTCACCTGATGGTTACTAATCCTATTGATTATGTTGAACCTTTGGGAAAAGCTGGTGCTTCTGGTTTTACATTTCATGTAGAGGCATCAAGAGATAACTGGAAAGAACTTGTCCAAAAAATTAAGTTACATGGCATGAGGCCTGGTGTGGCGTTAAAGCCTGGGACACCCATTGGAGAGGTTTATCCCCTGGTTGAAGCTGAAAATCCTGTGGAAATGGTTCTTGTGATGACTGTAGAACCTGGATTTGGAGGACAAAAGTTTATGCCAGAGATGATGGACAAGGTACGGATACTGAGGAAGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGGCCTTCAACCATAGACATGGCTGCATCAGCAGGGGCAAATTGCATTGTTGCTGGAAGCTCAGTGTTTGGAGCCCCTGAGCCAGCTCAAGTAATATCCTCACTAAGGAATTCTGTTGAGAAAGCCAAGCAAACATGTTAA 594 0.4293 MKVYYLPICELRHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPIDYVEPLGKAGASGFTFHVEASRDNWKELVQKIKLHGMRPGVALKPGTPIGEVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMDKVRILRKKYPSLDIEVDGGLGPSTIDMAASAGANCIVAGSSVFGAPEPAQVISSLRNSVEKAKQTC* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02298 197 FunFam Ribulose-phosphate 3-epimerase 5 197 - -
Rops8g02298 197 SUPERFAMILY Ribulose-phoshate binding barrel 13 192 IPR011060 -
Rops8g02298 197 Gene3D Aldolase class I 11 197 IPR013785 -
Rops8g02298 197 CDD RPE 13 187 IPR000056 GO:0005975|GO:0016857
Rops8g02298 197 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 111 133 IPR000056 GO:0005975|GO:0016857
Rops8g02298 197 Pfam Ribulose-phosphate 3 epimerase family 13 174 IPR000056 GO:0005975|GO:0016857
Rops8g02298 197 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 12 195 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02298 Rops-Chr8 52910348 52916593 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02298 K01783 - gmx:100527490 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02298 8 52910348 52916593 Rops8g02298 8 52910348 52916593 ECH