Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02290 ATGTTGAACTCCAACGGTCTTCTTTCAAGTAAAAGTCCTTTGAGGGTTGCAGCTTACTGTTTCAAGCAGCTTAAGAAAGCTCAGGTCTTTGACACTGACGTTCCCTCTTCTGTTGACAAGATTTTGCAAGATGAAATGGCTGTTGTTTCCTATAGAGTGCTGGCCTATCTTCTTCTTGGAGTTGTCAGAATATACTCAAAGAAGGTTGAATATCTGTTCCATGATTGCAATGAGGTGCTCATTAGAATCAATAAATTTGTGATCAATACAAAAGACAATGCACATGTGGAAACCTTGCGTATGTCTGTTACTATACCAGACAGATTTGAGTTGGATGCTTTCAATCTGGATATTGTTGAAGATGCTGGCGGGGGTCATATTGCTCCCCAGGAAGACATTACTCTTAAAGAGGTTTTGTGTAAAACTGAGGGATTTGCGCAGTTTTCTCAAGACAAGTTTGAGGAGTTTGATTCTGGTGGAAATGACTGTTCTGCTGATCACCATATGTTGGAAGATGTTCGTCAGTCTCACCTGATTAACATGGACTTTGAAGTTTTTCCACCAAATAGTCCAATTAATTTACTAGGAAGCAACAATTTGTTTCATTACAGCATATTCTCACAAAAGGAACCAATGAACTTTGACGCTGGTCTAGTTCTTGAAGGAATAGAAAAAGAATCTGTCAACTTGTTTGGTCAAGATCAACAAATAAATGAAGATCAGACAGTTCAAGAAATTGTACCATATGAGGATGAAATCCATGAAGAAAGAAGTAGAATATCTCAAGAGGAATCTATGGATATCAGTATGTTTTCTGGGAGAGAGAAGGAACCCGTTTTATCTGTTGAAGAATTTAATGAATCTCATCAAGTTGACAATGAGCATAGTATGGCCAAGGAAACATCAAGCTCATTATGCCAAACGCATCAGGAAATTATTGAAGTTCATGAAGCAAAAAGTGTTCAAGAAAGTATAGAAAGGCCTCAGGATGATAAATCCTATCAAGAAAGATGCGGGGACCATGACGCCTCTTCTGTTGCAAAGGACAGTCTTGAAAAGCTTATTGACGTGTCTGTTGAAGAACATGATAACAAAGGCAAATTGGAGTTTCGAGGAAAGGTTTCACTTGACGATGGAAAACTTGGTGTTATTCCAGCAAAGTCAAAAAATCTTGATGTAACTCCTCAGTCTAAGTTTCAAGGTGGTTCAGTTGGAAGACCAAAACCAGGTGATACAACACCAGAGTTCATGATTATTTCAACACCAGCTGTGAGAGAGCGTGCTCGCTTTTCAAGGAAAAGAAAATTTGTTCTTGATGGAATGCTAGTTCTTCCTAATGAGGTACTTAGAAAGAGCATACATGATGCAAGTGACTTAATTTCTAACCGAAGAAAATTTCGTCGTACTTTGCTTTCAATGCAGAGAGAATCTCGCATTTCCAGTCTTCCTGATGGATTCTATGAGTCTTTGCTTCCTTGTTACGCCTCAGAGCTTCGGTTCCTGTTCTATGAAAAGAAAATGGAAATACCTGATTCCCTTGAAATTGTGGAAACTCCAGGGAAGTTAGATGTGTCAGAATCCCAAACTGTTGCTAGTCCAGAGCATGTAGAAACTGCTCCACAAACCCCTCCCCGGTGCCCAGATTCCCTCATAATTGAGGAAACTCCAGGGAAGTTAGATGTGTCTGAATCTCAAACTTCTTGCAGTCCAGAGCACATAGCAACTGCTCCACAAACCCCTCCTCCGTGCCAAAAGTTTAAAGTTAGGTCAACTGAGCACCCAGAGAGAATTGAAATTCAATACTCAGATAATTTAGGACCTGCAAATCCACATGAAAGCATAGAGAGAGAACAATCTTTGGAAAAGAATGAAGTACTTAATCTGATGGAAGAGTTTAATGTGGAAACATTGAATTCCTATGAAGGTTTAGAGAGGGAGCAATGTTCGACAAAAGATGAAGATCTTAATCTGATGAATGAGGAGATAAATTCATGTGAAACAGAGAATTCAGAATTGTTAGCTGGGTGGTCTGAGCGAACCAGGAAAGTTGCAAGATACTTGCACAAGAGTTTTCTAGATCGAAGGAAACAAAGAGGGGGGGATGTTGTGAACTTTTCACAAGTTTTAGGAGGACGGGTCAGGAAAGAATGCGCAAGGCTATTTTATGAAATACTGGTTTTGAGAACTACTAGTTATGTGGATGTGAAGCAAAACAAAGCATATGGTGATATTGCAGTCTGGAAGCTCCCAAAATTAGATCAAACTTTTGGAGTTGATGGTCTGTCAAATGACATAAGTACATGTCCTAGTAATACTTCGCCAAATTTGTTGATATATGCAACAAGTTCCTCTGTACAGTGA 2361 0.3931 MLNSNGLLSSKSPLRVAAYCFKQLKKAQVFDTDVPSSVDKILQDEMAVVSYRVLAYLLLGVVRIYSKKVEYLFHDCNEVLIRINKFVINTKDNAHVETLRMSVTIPDRFELDAFNLDIVEDAGGGHIAPQEDITLKEVLCKTEGFAQFSQDKFEEFDSGGNDCSADHHMLEDVRQSHLINMDFEVFPPNSPINLLGSNNLFHYSIFSQKEPMNFDAGLVLEGIEKESVNLFGQDQQINEDQTVQEIVPYEDEIHEERSRISQEESMDISMFSGREKEPVLSVEEFNESHQVDNEHSMAKETSSSLCQTHQEIIEVHEAKSVQESIERPQDDKSYQERCGDHDASSVAKDSLEKLIDVSVEEHDNKGKLEFRGKVSLDDGKLGVIPAKSKNLDVTPQSKFQGGSVGRPKPGDTTPEFMIISTPAVRERARFSRKRKFVLDGMLVLPNEVLRKSIHDASDLISNRRKFRRTLLSMQRESRISSLPDGFYESLLPCYASELRFLFYEKKMEIPDSLEIVETPGKLDVSESQTVASPEHVETAPQTPPRCPDSLIIEETPGKLDVSESQTSCSPEHIATAPQTPPPCQKFKVRSTEHPERIEIQYSDNLGPANPHESIEREQSLEKNEVLNLMEEFNVETLNSYEGLEREQCSTKDEDLNLMNEEINSCETENSELLAGWSERTRKVARYLHKSFLDRRKQRGGDVVNFSQVLGGRVRKECARLFYEILVLRTTSYVDVKQNKAYGDIAVWKLPKLDQTFGVDGLSNDISTCPSNTSPNLLIYATSSSVQ* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02290 786 SUPERFAMILY "Winged helix" DNA-binding domain 679 752 IPR036390 -
Rops8g02290 786 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 754 IPR039781 GO:0007062|GO:0008278
Rops8g02290 786 MobiDBLite consensus disorder prediction 524 549 - -
Rops8g02290 786 MobiDBLite consensus disorder prediction 320 343 - -
Rops8g02290 786 CDD Rad21_Rec8_M_AtSYN1-like 429 505 - -
Rops8g02290 786 Gene3D Structural maintenance of chromosome 1. Chain E 678 756 IPR023093 -
Rops8g02290 786 MobiDBLite consensus disorder prediction 571 591 - -
Rops8g02290 786 Pfam N terminus of Rad21 / Rec8 like protein 1 93 IPR006910 GO:0005515
Rops8g02290 786 MobiDBLite consensus disorder prediction 394 413 - -
Rops8g02290 786 Pfam Conserved region of Rad21 / Rec8 like protein 700 747 IPR006909 -
Rops8g02290 786 FunFam Sister chromatid cohesion 1 protein 4 679 756 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02290 K06670 - qsu:112016663 514.998