Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02267 ATGGGAACTGAGTCTCCTTCAACAAATCAAAAGCCTATTGCTTCAGGGGATGAAAAATTTCCTTTCTCAGTTGCAGAGATAGACAAAAGAACAGCTGAGCAGAAGGCAATTGATGATTGGCTTCCCATCACTTCTTCAAGGAACGCAAAATGGTGGTACGCTGCTTTTCACAACGTCACTGCCATGGTTGGAGCTGGTGTCTTGAGCCTTCCATCTGCCATGGCAAGTCTTGGATGGGGTCCTGGTGTGGTTATTCTGGTGCTATCATGGGTAATCACTCTATACACCCTGTGGCAAATGGTGGAGATGCATGAAATGGTGCCTGGGAAACGGTTTGACAGATACCATGAGTTGGGGCAACATGCCTTTGGAGAAAAGCTAGGACTTTGGATTGTGGTGCCACAGCAACTGATATGTGAAGTTGGGGTGGACATTGTGTACATGGTCACTGGAGGAAAATCACTGCAGAAAATTCATGACCTGGTGTGCAAAAATAATTGCAGACAAATGAAGACTAGTTATTTTATCATGATCTTTGCCTCTGTTCACTTTGTTCTTGCCCACCTTCCCAATTTCAATGCCATCTCTGGTATTTCCTTGGCTGCAGCAGTCATGTCTTTGAGTTACTCAACAATTGCATGGGCTGCTTCTGTGAAAAAGGGAGTTCAGGAAGATGTGCAATATGGCTACAAAGTCACCACCCCAGCAGGAACAGTTTTCAGTTTTCTCAGTGCTTTAGGTGATGTTGCATTTGCCTATGCCGGACACAATGTGGTGTTGGAGATTCAAGCAACAATCCCTTCCACCCCAGAGAAGCCATCAAAGGGACCCATGTGGAGGGGAGTGGTAGTAGCCTATATAGTTGTAGCTTTGTGCTATTTCCCTGTTGCTCTTATTGGGTATTGGATGTTTGGCAATGCAGTTGCAGATAATATCCTTGTCTCTCTAAACAAACCCACTTGGCTTATAGTAGCAGCTAACATGTTTGTTGTCATCCATGTTATTGGAAGCTACCAGCTATATGCAATGCCAGTTTTTGACATGATTGAAACTGTATTGGTCAAAAATTTGCGTTTCAAGCCAAGCAGACTGCTAAGATTTGTTGTTCGCAATATTTATGTTGCATTCACAATGTTTGTGGGCATTACATTCCCCTTCTTTGGTGCCCTCCTTGGATTTTTCGGAGGATTTGCGTTTGCTCCAACAACGTACTTTCTCCCCTGCATCATGTGGCTTGCTGTTTACAAACCGAGGAAGTTCAGCTTATCTTGGTTCACCAACTGGATCTGTATTATACTTGGCCTCTTGCTGATGATTCTGTCACCAATCGGTGGATTAAGGCAAATCATACTCAATGCCAAAACCTATGGGTTCTACACTTGA 1383 0.4396 MGTESPSTNQKPIASGDEKFPFSVAEIDKRTAEQKAIDDWLPITSSRNAKWWYAAFHNVTAMVGAGVLSLPSAMASLGWGPGVVILVLSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLICEVGVDIVYMVTGGKSLQKIHDLVCKNNCRQMKTSYFIMIFASVHFVLAHLPNFNAISGISLAAAVMSLSYSTIAWAASVKKGVQEDVQYGYKVTTPAGTVFSFLSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWRGVVVAYIVVALCYFPVALIGYWMFGNAVADNILVSLNKPTWLIVAANMFVVIHVIGSYQLYAMPVFDMIETVLVKNLRFKPSRLLRFVVRNIYVAFTMFVGITFPFFGALLGFFGGFAFAPTTYFLPCIMWLAVYKPRKFSLSWFTNWICIILGLLLMILSPIGGLRQIILNAKTYGFYT* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02267 460 FunFam Lysine histidine transporter 1 44 455 - -
Rops8g02267 460 Gene3D Amino acid/polyamine transporter I 44 457 - -
Rops8g02267 460 PANTHER OS05G0424000 PROTEIN-RELATED 44 445 - -
Rops8g02267 460 Pfam Transmembrane amino acid transporter protein 48 444 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02267 Rops-Chr8 52198913 52203033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02267 21 460 Organic Solute Cotransporters AT1G48640 73.815 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02267 K26385 - gmx:100790838 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02267 8 52198913 52203033 Rops8g02267 8 52198913 52203033 ECH