Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02266 ATGGGAACTCAAGCACCAACAGATTTTGATACAAAATCAGAGAGACAGAAGGCCATTGAAGACTGGCTTCCAATTACTTCTTCAAGGAATGCAAAATGGTGGTACTCAGCTTTCCACAATGTCACTGCCATGGTTGGGGCTGGTGTTCTTAGTCTTCCTTATGCCATGTCTGAACTTGGATGGGGTCCCGGTGTAACTGTACTAGTCCTCTCATGGATCATTACTCTGTACACCCTATGGCAAATGGTTGAGATGCATGAAATGGTTCCTGGAAAACGTTTTGACAGATACCATGAACTGGGTCAGTATGCCTTTGGTGAAAAGCTAGGTCTTTATATTGTGGTGCCTCAACAACTCGTGGTTGAAATTGGGGTGAACGTTGTATACATGGTCACTGGGGGAAAATCATTGAAGAAGTTCCATGATACCGTTTGTTCCAGCTGCAAACAGATCAAATTGACCTTTTTCATTATGATTTTTGCCTCTGTTCACTTTGTATTGTCTCACCTCCCCAACTTCAACTCCATTTCTGGAGTATCTTTGGCAGCAGCAGTCATGTCCTTAAGTTATTCTACAATTGCCTGGGCAGCTTCTGCTCATAAGGGTGTTCAAGAAAATGTCCAGTATGGTTACAAAGCTAAGAGTACATCAGGAACAGTCTTCAACTTCTTTAGTGCCCTTGGTGATGTTGCTTTTGCCTATGCTGGACACAATGTGGTGCTGGAAATCCAAGCAACAATTCCATCTACACCTGAGAAGCCATCCAAGGGTCCTATGTGGAGAGGAGTAGTTGTTGCCTACATAGTTGTGGCTTTGTGTTACTTCCCAGTTGCCCTCATTGGTTACTGGATGTTTGGCAATGAAGTTAAAGACAACATCCTCATCTCTTTAGAGAAACCAAAATGGCTCATTGCAATGGCTAACATGTTTGTTGTCATCCATGTTATTGGAAGTTATCAGATTTATGCAATGCCAGTGTTTGACATGATTGAAACTGTGATGGTGAAGAAGTTGAATTTCAAACCTAGCAGAATACTTCGTTTTATTGTACGAAATGTCTATGTGGCATTCACAATGTTTGTTGGTATTACCTTCCCCTTTTTCGGTGGTCTCCTAGGATTTTTTGGAGGATTTGCTTTTGCTCCAACAACATACTTTCTTCCTTGTGTCATGTGGCTTTCAATATACAAACCAAGGAAATTCAGCTTGTCTTGGTGGACTAACTGGATCTGTATTGTGTTTGGCCTATTACTGATGATTTTGTCACCTATTGGAGGATTGAGGACAATCATACTTGATGCCAAGACTTACAAGTTCTACTCTTAA 1326 0.4148 MGTQAPTDFDTKSERQKAIEDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSELGWGPGVTVLVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLVVEIGVNVVYMVTGGKSLKKFHDTVCSSCKQIKLTFFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWAASAHKGVQENVQYGYKAKSTSGTVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWRGVVVAYIVVALCYFPVALIGYWMFGNEVKDNILISLEKPKWLIAMANMFVVIHVIGSYQIYAMPVFDMIETVMVKKLNFKPSRILRFIVRNVYVAFTMFVGITFPFFGGLLGFFGGFAFAPTTYFLPCVMWLSIYKPRKFSLSWWTNWICIVFGLLLMILSPIGGLRTIILDAKTYKFYS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02266 441 PANTHER OS05G0424000 PROTEIN-RELATED 31 426 - -
Rops8g02266 441 Pfam Transmembrane amino acid transporter protein 30 425 IPR013057 -
Rops8g02266 441 Gene3D Amino acid/polyamine transporter I 26 435 - -
Rops8g02266 441 FunFam Lysine histidine transporter 1 26 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02266 Rops-Chr8 52189292 52194441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02266 44 441 Organic Solute Cotransporters AT5G40780 85.930 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02266 K26385 - gmx:100791368 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02266 8 52189292 52194441 Rops8g02266 8 52189292 52194441 ECH