Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01003 ATGATAGAAGAAGGAGGAGAGATTGGTTGTAAAGAGTTTGGTGATGGCGTTGGGGAAGTTTGTGAAGATGCCCATAATTGTTCTTTATCTACACAAGTTAAACATGATGACAAGCTAACTGCTGAGAAGACATCAGAAAAGCATGAAGAAAAACCAATGGATACTAGTGATGGGAAAGAGCTGTGCTTTGGATGCGTCAAACAGCCAGATTGTTCATCATCACTTCCAGTTCAAAAGCCTGATGACCTCAAGGCAGGGGAGCTTGGAAATTGTGATGCAGCAGAGATGATAGTTACTACACAAAAATCATTTTTAACAAGACATCCATGTGAGGATAACTTGAAGAGGGATTTTGGTCCCCCAGTAGAAAAGGCTTCACTGAATGGTTGTGATACTCGGAGAAATTCTTGTGCCAGTGAAAGCTCTGGTGATGAATGTGACAATTTTTCTAATAAAAAAATTATTTCCCCGTCAGTTGAATTGGATGCTGGGAATGATTTCAATTTGATCAACTCAGAAACATCCATTACAAAGGAATTCTGTTCTGCACGTGGCAATGAATCTCCTGCTTTGAATAAGTCAATGGAAGAATTTACTGATTCATCCTCCAAAGATAATTTCAGGAACCCATCTGGACATATGGTAGTGCAGACCAACTTGACCAGTCCATCAATAACCTTCTATCGATGTTATAAAAGAAAAAAGTGTATGGATGGGACTGATAGGCAAAGCATGTTGCTGCACGGGAAGAAAAACATTTCAGTGCTAACCAAGTGGAGCATGCTTTCAAATGGTAATCCTTGTTCTAGTGATGAATCATCTTGTGACGAATGTCCTGTAGATAATGTACCAGACCTTAATCAATCAGTGGAGCTTTCAGAAAGAGGGAAGCCATTGAATCAAACTCAAGATGAAACATCTTGTAGAAGCTGTTCTATGGTTTTTCTAACAGACCTTAATCAGTCAGCAGAACTTTCAGAAAGAGGGGAACTTTATCAAACTCAAGAAAAAGTGAAAAATGCGGACACTCCATGCACTAGTGGAGTTGTTTCTGAAACCTGTATGACACACATGAGAGAGCGACTGCATCATGGGGAAGACATAGTAAAAACTGTCTCTCATACAGCTGGAACAGAAGTTCCAAGCCAGAGTTGTCCGATTCACAAGGAAGCCCAACATGTTCATAAGGATTGTCAAGGAGTCTCTATCAATGTTGATTCTAGGTGTCCTGCTGCCCCAACTCCCGATCAGGAACTAGAGAAGTCCCAGCCCTCTGAAAGAGAGGCCATTCAAAATGATACGTGTAATGGCATGAATAGAAGTGGAGAATACCAACCTCAGTTTGACCTGCCTGTTAACTCTGCAGAAGATTGCACTGTTGATTTGAACTTGATTGCTAATAAGCATCCCCATCATTTGAGGATGAGAACTCTTGGAGCCAAAGCGGACTCTACAAGCAGTATAACCGCCACTGCTGGAGATCAAGTTTCTCAGTTGGAACTTTTAAACTCTAGAAATACACAGCAGATTTCAGAAGGAAAAGCTATTGATGGTGTTTGCTCAAGTATTACTCAACCTCAGTCAGCTGGTTACATGATGTCTGATGAAAGAATGAATGTTGAACAAACTAAAACTAATAAATCAAAACACATGCCGATCATTTCTCTTTCTTTGGGTTTGTCTTTACCCATAGTGCTGAAGACTGGAGGCTGTGATTCCATGAATTGTTTGCCTGTATTGCCTTTGTCAAATTCAACCCCTGAAACTAGAGATATTGTCCAAGATGGATTATATCAGTCTTCACCAAACCAGAAACCATTGCTTCTCAGGCACAAGGTAGTGCTGGACAACATTGTAAACAAAGCAAGAGCTTTAAATGAAAGAGGCAACTTTCAAGAAAGTTTAAGGCCACACCCTATCATGTGGTCTGAAGAGGAGTTGGATTTTCTCTGGATTGGTGTGAGGAGACATGGTAGGGGCAATTGGGATGCTATGCTAAGGGATCCAAGATTGCAATTTTCACCATTAAGGGTACCAGGGGACCTTGCTGAGCGGTGGGAGGATGAACAAGTAAAACTTTTGAAAGATTTTGGTGTTCCACAGTTCATTTATCCAAACGCAGAAAAGGCGGCGGCAGCATTGTACGGAAACTTTTGCTACTTAGATCCCAAATCAGGTTTTTGGAGACAAAATACAATGGAGGAGACTCTGCTGTCACCTGAAGATGTATTTTCTTATAGGGAAAGTAATCCTTTGAAGAGATCTCTTGCCAGGTTAAAATTTCAAAGTAATGCCACTGTCCACAGTCATAGACATTCCAGGAGGGCCTCTTACAACAATAACATGGATAAGTATGAATGGCGATTTTTCAATTCTCCAGGAAGCTTGAGCATTTCCAGGGAAAATTCATGTTCAAATGATTATCCCTATAATTGTTCAGCTGCAAAGACTAATTTGCCTCACTGGCTCAGAGAAGCAGTTATTACTCCTCCAAAGTCAGTGGAGCCAAATCTGTCTGCACCTGTTTCATTGAGTTCTCATCCACATCCAGAGATGCTGGGAGCTGCAGAGTGTTGCTTTGATGCCGGTAAGTCATGCTTTCTGCCTCAAAATCGGTTAGGTGGTTTGAGGACAAGTGAGCTACATACATCAAATGGTTCTCGCAATTCAACCTATTCTAGAAGAAAATATGGGATGATGAAAATGAACAAGTCTCTAGAACATCATGTCACCAAACCAAATGACTTGATCATTATTGATAGTGACACATCTTCAGAAGAGACTATATCTGATGATCACTGTGCCAGCTTGGAGTTCTGA 2820 0.4092 MIEEGGEIGCKEFGDGVGEVCEDAHNCSLSTQVKHDDKLTAEKTSEKHEEKPMDTSDGKELCFGCVKQPDCSSSLPVQKPDDLKAGELGNCDAAEMIVTTQKSFLTRHPCEDNLKRDFGPPVEKASLNGCDTRRNSCASESSGDECDNFSNKKIISPSVELDAGNDFNLINSETSITKEFCSARGNESPALNKSMEEFTDSSSKDNFRNPSGHMVVQTNLTSPSITFYRCYKRKKCMDGTDRQSMLLHGKKNISVLTKWSMLSNGNPCSSDESSCDECPVDNVPDLNQSVELSERGKPLNQTQDETSCRSCSMVFLTDLNQSAELSERGELYQTQEKVKNADTPCTSGVVSETCMTHMRERLHHGEDIVKTVSHTAGTEVPSQSCPIHKEAQHVHKDCQGVSINVDSRCPAAPTPDQELEKSQPSEREAIQNDTCNGMNRSGEYQPQFDLPVNSAEDCTVDLNLIANKHPHHLRMRTLGAKADSTSSITATAGDQVSQLELLNSRNTQQISEGKAIDGVCSSITQPQSAGYMMSDERMNVEQTKTNKSKHMPIISLSLGLSLPIVLKTGGCDSMNCLPVLPLSNSTPETRDIVQDGLYQSSPNQKPLLLRHKVVLDNIVNKARALNERGNFQESLRPHPIMWSEEELDFLWIGVRRHGRGNWDAMLRDPRLQFSPLRVPGDLAERWEDEQVKLLKDFGVPQFIYPNAEKAAAALYGNFCYLDPKSGFWRQNTMEETLLSPEDVFSYRESNPLKRSLARLKFQSNATVHSHRHSRRASYNNNMDKYEWRFFNSPGSLSISRENSCSNDYPYNCSAAKTNLPHWLREAVITPPKSVEPNLSAPVSLSSHPHPEMLGAAECCFDAGKSCFLPQNRLGGLRTSELHTSNGSRNSTYSRRKYGMMKMNKSLEHHVTKPNDLIIIDSDTSSEETISDDHCASLEF* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01003 939 MobiDBLite consensus disorder prediction 428 446 - -
Rops8g01003 939 Gene3D - 607 699 - -
Rops8g01003 939 MobiDBLite consensus disorder prediction 409 446 - -
Rops8g01003 939 MobiDBLite consensus disorder prediction 35 55 - -
Rops8g01003 939 SUPERFAMILY Homeodomain-like 638 687 IPR009057 -
Rops8g01003 939 CDD SANT_TRF 640 686 - -
Rops8g01003 939 ProSiteProfiles Myb-like domain profile. 642 690 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01003 Rops-Chr8 21239074 21252927 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01003 - - tpra:123888194 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01003 8 21239074 21252927 Rops8g01003 8 21239074 21252927 ECH