Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01001 ATGGCGTCGAGTACTCTCCACCGTTCAAACTCTTCCTCTAGTGACATTTCAGTGTATGTGGACGCTGATTCTAGAGCCATTGTCACTAATTCTTTAGGAAATATTGACAGGAATTCATCAACTACGTCACAGAATAAAGCAGCACCAAAAGGAGATGAAGGTGTTAGGGCTGCTGAAGCTGAACCATCATCAAATCAAGGTCACCGTGAGAATGGTGCTAAAGTTGGGAAGAGCAATACAATCAGTTCATTGGTTGCTAATTTCTTTGATGAGACTGTTCCCCTCAAGAAAAGGGTTTGGCCAAAAATCACGATGCGGCGGCTAAAAAAAGCTTTTCTAGTTAAGGATGATGGTACTGTAGATATCGATGTTCCAGGAGATATTAAGCCTCACTCTCCAGAAATTGGAAATGGGGTTATCGATCGTGAAGAACATGATGAACCTTGCAAGGGAATACTCAATCAGGATATTGAACCTATTCAGCCACTTCAAATTGTAATGCTTATAGTTGGCACACGGGGAGATGTCCAGCCGTTTGTTGCTATCGGGAAGCGTCTGCAGGTAGATGGACACAGGGTTAGGCTAGCTACTCATAAAAATTTTGAAGATTTTGTATTGAATGCTGGCTTGGAGTTTTACCCGTTGGGTGGGGATCCCAAAGTTCTTGCTGGTTATATGGTCAAGAATAAAGGCTTCTTACCATCAGGACCTTCAGAAATACAATTGCAAAGAAATCAAATCAAGGCTATTATTGATTCTTTGCTTCCTGCATGCAACAGTCGTTACCCAGATTCTAGTGTTGCATTTAAAGCAGATGCGATAATTGCCAATCCTCCAGCATATGGGCATACTCATGTTGCTGAGTATCTACAAGTTCCACTTCACATATTCTTCACGATGCCATGGACGCCTACTAGTGAATTCCCTCATCCTCTTTCCCGTGTTAAGCAACCAATTGGATATAGACTGTCATATCAAATAGTTGATTCTTTAATCTGGCTTGGAATACGAGACATGATAAATGAGTTTAGGAAGAAGAAGCTGAAGCTAAGGCCTGTTACTTATCTAAGTGGATCTCACACTTCCCCTCCGGATGTGCCCTATGGTTATATATGGAGCCCTAACTTGGTCCCTAAGCCAAAAGATTGGGGGCCTAGCATCGACATTGTTGGATTTTGTTTCCTTGACCTTGCTTCAAATTATGAACCACCAAAATCGCTAGTAGATTGGCTTGAAGGAGGCAAAAAACCTGTTTATGTTGGATTTGGTAGCCTTCCTCTACAGGAACCAGAAAAAATGACAAGAATTATAGTTGAAGCTCTGGAACAAACAGGGGAGAGAGGTATCATCAACAAAGGCTGGGGTGGTCTTGGGAATTTGGCAGAACAAAATGACTCTGTGTACTTATTGGACAACTGTCCGCATGATTGGCTATTTCCACGATGCACTGCTGTGGTACATCATGGGGGAGCTGGAACAACTGCTGCTGGTCTTAGAGCTGAATGCCCAACAACTGTTGTACCATTCTTCGGGGACCAGCCATTTTGGGGAGAGCGGGTGCACGCCAGAGGAGTAGGTCCTGCACCCATCCCGGTGGAGGAGTTTACACTGGAAAAGCTGGTTGATGCCATACGCTTTATGCTGAATCCAGAGGTGAAGAAGCGTGCTGTTGAACTTGCTAACGCCATGAAAAACGAAGATGGGGTGGTAGGAGCAGTTACAGCCTTCTATAAACATTATCCAAGCCAAAAACTTGCTATTGAGGCCAAGCGCAAACCTGTAGCCTCAGTACATAAATGTTTCTTTATACGAGAATGCTTTGGTGGCTCTAAAACTTCTGAATGA 1845 0.4352 MASSTLHRSNSSSSDISVYVDADSRAIVTNSLGNIDRNSSTTSQNKAAPKGDEGVRAAEAEPSSNQGHRENGAKVGKSNTISSLVANFFDETVPLKKRVWPKITMRRLKKAFLVKDDGTVDIDVPGDIKPHSPEIGNGVIDREEHDEPCKGILNQDIEPIQPLQIVMLIVGTRGDVQPFVAIGKRLQVDGHRVRLATHKNFEDFVLNAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIQLQRNQIKAIIDSLLPACNSRYPDSSVAFKADAIIANPPAYGHTHVAEYLQVPLHIFFTMPWTPTSEFPHPLSRVKQPIGYRLSYQIVDSLIWLGIRDMINEFRKKKLKLRPVTYLSGSHTSPPDVPYGYIWSPNLVPKPKDWGPSIDIVGFCFLDLASNYEPPKSLVDWLEGGKKPVYVGFGSLPLQEPEKMTRIIVEALEQTGERGIINKGWGGLGNLAEQNDSVYLLDNCPHDWLFPRCTAVVHHGGAGTTAAGLRAECPTTVVPFFGDQPFWGERVHARGVGPAPIPVEEFTLEKLVDAIRFMLNPEVKKRAVELANAMKNEDGVVGAVTAFYKHYPSQKLAIEAKRKPVASVHKCFFIRECFGGSKTSE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01001 614 Pfam Glycosyltransferase family 28 N-terminal domain 165 309 IPR004276 GO:0005975|GO:0016758|GO:0030259
Rops8g01001 614 CDD GT1_Gtf-like 165 569 IPR002213 GO:0008194
Rops8g01001 614 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 418 559 IPR002213 GO:0008194
Rops8g01001 614 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 50 590 - -
Rops8g01001 614 MobiDBLite consensus disorder prediction 31 76 - -
Rops8g01001 614 Gene3D Glycogen Phosphorylase B; 394 563 - -
Rops8g01001 614 Gene3D Glycogen Phosphorylase B; 165 568 - -
Rops8g01001 614 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 165 395 - -
Rops8g01001 614 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 396 563 - -
Rops8g01001 614 MobiDBLite consensus disorder prediction 31 48 - -
Rops8g01001 614 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 165 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01001 Rops-Chr8 21224765 21239214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01001 61 610 Glycosyltransferase AT3G07020 67.266 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01001 K05841 - gmx:100779695 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01001 8 21224765 21239214 Rops8g01001 8 21224765 21239214 ECH