Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00989 ATGGTCATGGGACACTCCATGCCCCACCATTGTTTTTGGCATTCACTCACACTCCTGTGGCTGTTTCTTCTGTGTGCAACCCCTTCTCACTCTGTTGATATTCACCCACAAGACAAAGCTTCACTTTTGTGGTTCAAATCATGGTTGCAAGGCCCTAACCAGAGTTTGTCCAACTGGGTAGGGTCTAACTGCACTACATGGAGTGGAATCACCTGTGACAACAACACTGGCAGGGTGATTTCTATTAACCTGACAAGTATGAACTTGTCTGGCCAAATCCACCCTAGTTTTTGTAACCTTTCATATCTTAACAAGGTGGCTTTGTCTCACAACAACTTCTCATGCCCTCTTCCTGTTTGCTTTGGGAACTTGCTTAACCTTAGAGCCATTGATCTCAGCCACAACAAGTTTCATGGTGGAATACCTGACTCTTTCATGAGGCTTAAGCACCTTACTGAACTTGTTTTGAATGGGAACCCAGCTTTGGGAGGTCCACTGCCTGTTTGGTTAGGTAACTTCTCTGCAAATCTTGAGAGGCTCCATTTAGGTTTCAGTTCATTCAGTGGGAGCATACCTGAGAGCTTGCTTTATTTGAAGTCCCTCAAGTATTTGGACCTTGAAAACAATCTCTTGTCTGGTAATCTGGTTGATTTTCACCAACCGTTGGTTTCTCTCAATCTTGCTTCCAATCACTTTTCTGGTACTTTGCCTTGCTTTGCAGCTTCAGTTCAGTCAATAACTGTGTTAAATCTGTCTAACAATTCTATTGTGGGGGGATTACCTGCTTGTATTGCTTCGTTGGAAGCTTTGACTCATTTAAATTTATCAGGGAACCACTTGAAGTATAGAATATATCCAAGGCTTGTATTCTCGGAGAAACTTCTTGTTTTGGACTTGAGTAACAATGATTTGTCAGGTCCTATTCCAAGTAAAATTGCAAAGACTACAGAGAAACTTGGCCTTGTTCTTCTTGACCTTTCTCACAATCAATTCTCTGGTGAAATTCCTGTGAAAATTACTGAACTGAAAAGCTTGCAGGCCTTGTTCCTTTCTCACAATCTTCTTTCTGGAGAAATTCCCGCTAGAATTGGAAATTTGACTTATCTTCAAGTCATTGATCTCTCCCACAACTCTTTGTCTGGTACGATTCCATTCAGTATTGTTGGGTGCTTTCAGCTGTATGCTCTAATACTTAATAACAACAATCTTTCTGGTGTAATTCAACCTGAGTTTGATGCATTGGATATCTTGAGGATACTGGATATAAGCAACAACAGGTTTTCTGGGGCTATCCCACTCACTTTGGCTGGATGTAAATCTCTGGAGATTGTTGATTTTAGTTCCAATGATCTTTCTGGATCCTTGAATGATGCAATAATCAAATGGACAAACCTCAGGTATCTTTCTCTTGCTTACAACAAGTTCAGTGGAACTTTGCCCAGTTGGTTGTTCACATTTGAAGCAATAGAAACAATGGATTTCTCACACAACAAGTTTTCTGGCTTCATACCTGATATTAATTTTAAGGGTAGCTTGATATTTAACACAAGGAATGTCACTGTTAAAGAGCCATTGGTTGCAGCAAGAAAGGTTCAACTGAGAGTTTCAGTGGTTGTTTCTGATAGCAATCAACTCAGTTTCACTTATGATCTTTCATCAATGGTTGGAATCGATCTATCCAACAACTTGCTACATGGGGAGATTCCAAGGGGCTTATTTGGCCTACCTGGCCTAGAATATCTGAATTTGTCATGCAATTTTCTCGATGGACAGCTTCCTGGTTTGCAGAAAATGCAGAGTTTGAAAGCCTTAGATTTGTCACATAATTCCCTTTCAGGACATATACCAGGAAACATTTCTACCCTTCAAGATCTGACCATCTTGAATCTGTCTTACAACTGTTTTTCTGGATATGTTCCTCAGAAGCAAGGGTATGGAAGATTTCCTGGTGCATTTGCTGGAAATCCAGATTTATGCTTGGAATCTACAACAGGAATATGTGATGATGGAAGGGTTCCATCAGTGCAAGGCAGTTCTTTTAGGGAAGATAAGATGGATGGACCAATATCTGTTGGGATTTTCTTTATCAGTGCCTTTGTTAGTTTTGATTTGGGTGTTGTTGTTCTCTTCTGTTCTTCTCGGGCAAGAAATTACATTCTCCAAACTAAAGTTTGA 2175 0.4037 MVMGHSMPHHCFWHSLTLLWLFLLCATPSHSVDIHPQDKASLLWFKSWLQGPNQSLSNWVGSNCTTWSGITCDNNTGRVISINLTSMNLSGQIHPSFCNLSYLNKVALSHNNFSCPLPVCFGNLLNLRAIDLSHNKFHGGIPDSFMRLKHLTELVLNGNPALGGPLPVWLGNFSANLERLHLGFSSFSGSIPESLLYLKSLKYLDLENNLLSGNLVDFHQPLVSLNLASNHFSGTLPCFAASVQSITVLNLSNNSIVGGLPACIASLEALTHLNLSGNHLKYRIYPRLVFSEKLLVLDLSNNDLSGPIPSKIAKTTEKLGLVLLDLSHNQFSGEIPVKITELKSLQALFLSHNLLSGEIPARIGNLTYLQVIDLSHNSLSGTIPFSIVGCFQLYALILNNNNLSGVIQPEFDALDILRILDISNNRFSGAIPLTLAGCKSLEIVDFSSNDLSGSLNDAIIKWTNLRYLSLAYNKFSGTLPSWLFTFEAIETMDFSHNKFSGFIPDINFKGSLIFNTRNVTVKEPLVAARKVQLRVSVVVSDSNQLSFTYDLSSMVGIDLSNNLLHGEIPRGLFGLPGLEYLNLSCNFLDGQLPGLQKMQSLKALDLSHNSLSGHIPGNISTLQDLTILNLSYNCFSGYVPQKQGYGRFPGAFAGNPDLCLESTTGICDDGRVPSVQGSSFREDKMDGPISVGIFFISAFVSFDLGVVVLFCSSRARNYILQTKV* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00989 724 Coils Coil 724 724 - -
Rops8g00989 724 Gene3D Ribonuclease Inhibitor 318 387 IPR032675 -
Rops8g00989 724 Pfam Leucine rich repeat 392 451 IPR001611 GO:0005515
Rops8g00989 724 Pfam Leucine rich repeat 222 280 IPR001611 GO:0005515
Rops8g00989 724 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Rops8g00989 724 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Rops8g00989 724 SUPERFAMILY RNI-like 290 637 - -
Rops8g00989 724 Pfam Leucine Rich Repeat 600 620 IPR001611 GO:0005515
Rops8g00989 724 Gene3D Ribonuclease Inhibitor 35 317 IPR032675 -
Rops8g00989 724 PRINTS Leucine-rich repeat signature 598 611 - -
Rops8g00989 724 PRINTS Leucine-rich repeat signature 369 382 - -
Rops8g00989 724 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 317 510 - -
Rops8g00989 724 SMART LRR_typ_2 598 622 IPR003591 -
Rops8g00989 724 SMART LRR_typ_2 414 437 IPR003591 -
Rops8g00989 724 SMART LRR_typ_2 198 220 IPR003591 -
Rops8g00989 724 SMART LRR_typ_2 267 292 IPR003591 -
Rops8g00989 724 SMART LRR_typ_2 462 486 IPR003591 -
Rops8g00989 724 SMART LRR_typ_2 342 366 IPR003591 -
Rops8g00989 724 SMART LRR_typ_2 551 575 IPR003591 -
Rops8g00989 724 Gene3D Ribonuclease Inhibitor 388 671 IPR032675 -
Rops8g00989 724 SUPERFAMILY L domain-like 35 310 - -
Rops8g00989 724 PANTHER UNNAMED PRODUCT 321 693 - -
Rops8g00989 724 FunFam Leucine-rich repeat receptor protein kinase EMS1 546 642 - -
Rops8g00989 724 FunFam LRR receptor-like serine/threonine-protein kinase EFR 35 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00989 Rops-Chr8 21044953 21048127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00989 16 644 Receptor kinase-like Gene Family AT5G46330 32.227 9.31e-75 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00989 - - gmx:100814791 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00989 8 21044953 21048127 Rops8g00989 8 21044953 21048127 ECH