Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00988 ATGGCTTCGGTGTTCGTTTACCATGTGGTGGGTGATTTGACGGTGGGGAAGCCTGAGATTGTGGAGTTTCATGAGACTGAGACGGTGGAGAGTGCTATAAAGGCAATAGGGGAATCACCTGAAGGTAGCATACCCATTTGGAAGAAGAGATCTCATGTGGGTAGTAATATGATTGAAAAGAGTGATATGAGACAGCAGAGGTTTGTTGGTATTCTTAGTTCATTTGACATAGTTGCTTTTTTGGCTAAGAATCAGTGTTTGGAGGATCAGGATAAGGCCTTGAAGACACCTGTTTCTGAGGTTGTTGTTCCAAATAATTCTCTACTCAGGCTGGTTGACCCTGCAACAAGGTTGATAGATGCGCTGGACATGATGAAGCAAGGTGTGAAACGTCTGCTCGTTCCAAAGAGTGTAGTATGGAAAGGCATGAGTAAGCGTTTCTCATATATCTACTATGGCAAGTGGCTCAAGAATGCTGAAACTCCTAGCAGCAGCAGCAACAGTCTACCTACAAACATGAACCGGACCCCCTCATCTTCCAGTACATCAATCCGTGATAAGTTCTGTTGTCTCTCTAGAGAAGATGTACTCCGTTTTATCATTGGTTGTCTTGGAGCATTAGCTCCACTTCCTCTCACTTCCATAGCTGCCCTTGGAGCAATTAATTCAAACTACAGCTATATTGAATCTTCCACTCCAGCTGTTGAAGCAACTCAAAAGCTTCCTCAAGATCCAAGTGCAGTTGCAGTAATAGAAAGCATATCAGATGGTCAATGTAAGATCATTGGAGAAATTTCTGCATGTAAATTATGGAAATGTGATTACTTAGCTGCAGCATGGGCTTTAGCTAATCTCTCAGCAGGACAATTTGTTATGGGAGTTGAAGATAATGTTACCTCAAGGTGGCCTGAGTTTAATGTAAATTCAACAACTGGTGATAATGATTTAGTCAATGGTGGTGTTGGTTCAAGAAAACCAAGGAAATTCAGTAGCAGGAGTATTGGTTTCTTCAGTAATTCTGCAAGCCATAGCTTTGGTTCAAGGAGTATGTATAGGGGTAGAAGTGCACCCTTGACATGTAAAATTACTAGTTCATTGGCTGCAGTTATGGCTCAGATGCTATCACACAGGGCAACTCATGTTTGGGTGACTGAGGATGAGAGTGATGATGTTTTAGTTGGTGTGGTGGGATATGCTGATATTTTAGCTGCTGTAACCAAACCACCTACAACCTTCATTCCAGCAAATAGATCTACAGAGGGGTTTGGAAATGAAATCCAGAGTTGA 1287 0.4219 MASVFVYHVVGDLTVGKPEIVEFHETETVESAIKAIGESPEGSIPIWKKRSHVGSNMIEKSDMRQQRFVGILSSFDIVAFLAKNQCLEDQDKALKTPVSEVVVPNNSLLRLVDPATRLIDALDMMKQGVKRLLVPKSVVWKGMSKRFSYIYYGKWLKNAETPSSSSNSLPTNMNRTPSSSSTSIRDKFCCLSREDVLRFIIGCLGALAPLPLTSIAALGAINSNYSYIESSTPAVEATQKLPQDPSAVAVIESISDGQCKIIGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVTSRWPEFNVNSTTGDNDLVNGGVGSRKPRKFSSRSIGFFSNSASHSFGSRSMYRGRSAPLTCKITSSLAAVMAQMLSHRATHVWVTEDESDDVLVGVVGYADILAAVTKPPTTFIPANRSTEGFGNEIQS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00988 428 ProSiteProfiles CBS domain profile. 350 411 IPR000644 -
Rops8g00988 428 CDD CBS_pair_SF 19 134 - -
Rops8g00988 428 Gene3D - 334 407 IPR046342 -
Rops8g00988 428 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 409 - -
Rops8g00988 428 Gene3D - 4 137 IPR046342 -
Rops8g00988 428 SMART cbs_1 356 406 IPR000644 -
Rops8g00988 428 SMART cbs_1 19 82 IPR000644 -
Rops8g00988 428 Pfam CBS domain 356 405 IPR000644 -
Rops8g00988 428 SUPERFAMILY CBS-domain pair 355 406 IPR046342 -
Rops8g00988 428 SUPERFAMILY CBS-domain pair 6 134 IPR046342 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00988 - - gmx:100788752 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00988 8 21028488 21032310 Rops8g00988 8 21028488 21032310 ECH