Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00980 ATGGCAGCTGCTTCTCCAATGGCTCTCAAGTCCAGCTTCACTAGGCCTCTTGTCACACCCAAGGGCCTCTCTGGCTCTTCTCCACTCCCTCTCTTTCCTTCTAGAAGGCAATTTAGCTTCACAGTCAAGGCCATCCAATCTGAGAAGCCAACCTATCAAGTGATTCAACCAATCAATGGTGACCCATTCATTGGAAGCCTTGAAACTCCAATCACATCAAGCCCCTTGATAGCATGGTACCTATCCAACCTACCAGCATATAGAACTGCAGTAAACCCACTACTAAGAGGCATTGAGGTGGGTTTGGCCCACGGGTTCCTACTTGTGGGCCCATTTGTGAAGGCCGGGCCTTTAAGGAACACCCCTTATGCTGGAGGTGCAGGCTCTCTAGCTGCTGCTGGGCTTGTAGTGATCCTTAGCATGTGCCTTACAATCTATGGGGTTGCATCATTCAATGAAGGAGATCCATCAACTGCACCAGCATTGACCTTAACGGGCCGCAAGAAGGAGCCTGATCAGCTTCAAACAGCAGATGGTTGGGCCAAGTTCACTGGTGGGTTCTTCTTTGGGGGCATTTCTGGTGTTACTTGGGCTTACTTCCTCCTTTATGTCTTAGACCTTCCATACTTCGTTAAGTGA 639 0.4945 MAAASPMALKSSFTRPLVTPKGLSGSSPLPLFPSRRQFSFTVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVNPLLRGIEVGLAHGFLLVGPFVKAGPLRNTPYAGGAGSLAAAGLVVILSMCLTIYGVASFNEGDPSTAPALTLTGRKKEPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00980 212 Gene3D Photosystem I PsaL, reaction centre subunit XI 49 212 IPR036592 GO:0009522|GO:0009538|GO:0015979
Rops8g00980 212 SUPERFAMILY Photosystem I reaction center subunit XI, PsaL 55 211 IPR036592 GO:0009522|GO:0009538|GO:0015979
Rops8g00980 212 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC 6 212 IPR022980 -
Rops8g00980 212 FunFam Photosystem I reaction center subunit XI 49 212 - -
Rops8g00980 212 Pfam Photosystem I reaction centre subunit XI 54 206 IPR003757 GO:0009522|GO:0009538|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00980 Rops-Chr8 20932388 20934037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00980 K02699 - gmx:100527240 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00980 8 20932388 20934037 Rops8g00980 8 20932388 20934037 ECH