Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00971 ATGGCGTTGTTGTGTTTCACACCAACCGTGAACCCTTCTTCTTCCATCATCTGCAAATGCAAAGCCTCCATCCCCACGCGCTCCCACGCGCTCGACGCCTCTTATATCCGACGCGCCGCCATCCTCGCCGACAAATCCGCCGGCTTCACTTCCCCCCACCCCAACTTCGGATGCGTCATCGCCACCCCTTCAGGCGACGTCGCCGGAGAGGGCTACCTCTATGCTCAGGGCACCACCCCCGCCGAAGTGCAGGCCGTGCATTCCGCCGGTGAACGCTGCCGTGGCGCCACCGCTTACCTCAACATGGAACCCGGTGACTGTGACGGAGACAACGCCGCCGTCTCTGCTATGATCCAGGGAGGGGTTAAAAGGGTTGTAATTGGAATGAGGCATCCACTTCAACATCTTCGTGGTAATGCTGTTCGTGCTCTCAGAAGTCAAGGATTGCATGTTCATCTTCTTGGAGAGGATCTCAGTAGTAAGATTATAGAGGATGCCCAGAAAGAATGTCTTCTTGTCAATGCCCCTTTGATTTGTAGAGCTGCTTCACGTGTTCCCTTTTCTGTTCTCAAGTATGCTATGACCCTTGATGGAAAAATTGCTGCTAGCACTGGCCACGCATCATGGATAAGCAGCAAGCAATCTAGAAATCTAGTTTTTGAGCTGCGAGGTAGAAGTGATGCAATCATTGTGGGAGGAAATACCGTTCGAAAGGACAATCCAAGACTGACGGCCAGACATGGAGGTGGGCATATGCCGATTCGCATTGTAATGTCCCAGACTCTCAATCTTCCGGAGGAAGCAAACGTATGGGACATGTCTGAGGTTTCTACCATAGTTGTAACACAGAGGGGTGCAAGGAGGAGTTTCCAGAAGCTGCTTGCGTCTAAAGGAGTTGAAGTTGTGGAGTTTGACATATTGAATCCCCGAGATGTTATGGAGTATTTTCATGATCGTGGGCATCTATCAATTTTTTGGGAATGTGGAGGAACATTGGCTGCATCTGCTATTTCATCTGGAGTAATTCACAAGGTTTTTGCATTTGTTGCTCCTAAAATTATTGGTGGAGAGAAAGCACCATCTCCTGTGGGTGATCTTGGGATGGTTGAGATGTCACAGGCTTTAAATCTAATTGATGTTTGCTATGAGCAGGTTGGGCCTGACATGCTTATTAGTGGATTTCTTCAGCCCTTACCAGACATTGTGCCTATTATCCCATCACCCGAGGAAACTTTTGTTGTTGATCCTACTGTCTCACCATATGAGCCCAGAATTATATTTTTCTATAAAACATGGGATCCTTATGGTGCATTGTCAAATTTCTCTCCTCATCCCATTCAAGCGCCTGATGAAAATGGTGATTATGTGACTTGGTCGAGTGTGGAGCATTACTACCAGGCATACAAGTTTGTGGGGGTGGATGATACTTCTGCACAAGATTGTGTTGAAAGGATTAAATCTGCAAAAAGTCCAGAAGAAGCTGCAAGAATAGGAAGGTCAATGCAAAGGGAGCGACCTGATCTGGTAAGGTCTGACTGGGACAACATAAAGATTGATGTCATGTACAGGGCACTGAAATGCAAGTTCTCAATGTACCCTCATTTGAATTCTATGTTGCTTTCAACTGCTGGTTCTGTTTTAGTTGAGGCTTCACCACATGATCTCTTTTGGGGTGGAGGTCGAGAGGGAGAAGGCTTAAATTATCTTGGTCGACTTTTGATGAAATTGAGATCAGAGTTTCTTGGGGAATCTTCATCATCTAGTGAGACCCCTAGTTTAACTGTATAG 1788 0.4704 MALLCFTPTVNPSSSIICKCKASIPTRSHALDASYIRRAAILADKSAGFTSPHPNFGCVIATPSGDVAGEGYLYAQGTTPAEVQAVHSAGERCRGATAYLNMEPGDCDGDNAAVSAMIQGGVKRVVIGMRHPLQHLRGNAVRALRSQGLHVHLLGEDLSSKIIEDAQKECLLVNAPLICRAASRVPFSVLKYAMTLDGKIAASTGHASWISSKQSRNLVFELRGRSDAIIVGGNTVRKDNPRLTARHGGGHMPIRIVMSQTLNLPEEANVWDMSEVSTIVVTQRGARRSFQKLLASKGVEVVEFDILNPRDVMEYFHDRGHLSIFWECGGTLAASAISSGVIHKVFAFVAPKIIGGEKAPSPVGDLGMVEMSQALNLIDVCYEQVGPDMLISGFLQPLPDIVPIIPSPEETFVVDPTVSPYEPRIIFFYKTWDPYGALSNFSPHPIQAPDENGDYVTWSSVEHYYQAYKFVGVDDTSAQDCVERIKSAKSPEEAARIGRSMQRERPDLVRSDWDNIKIDVMYRALKCKFSMYPHLNSMLLSTAGSVLVEASPHDLFWGGGREGEGLNYLGRLLMKLRSEFLGESSSSSETPSLTV* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00971 595 Gene3D - 417 587 IPR037238 -
Rops8g00971 595 PANTHER DIHYDROFOLATE REDUCTASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_8G06820) 179 396 - -
Rops8g00971 595 Gene3D Dihydrofolate Reductase, subunit A 178 394 IPR024072 -
Rops8g00971 595 Gene3D Cytidine Deaminase, domain 2 27 159 - -
Rops8g00971 595 NCBIfam conserved hypothetical protein 426 579 IPR012816 -
Rops8g00971 595 SUPERFAMILY Cytidine deaminase-like 32 153 IPR016193 GO:0003824
Rops8g00971 595 Pfam RibD C-terminal domain 188 390 IPR002734 GO:0008703|GO:0009231
Rops8g00971 595 CDD NADAR 425 577 IPR012816 -
Rops8g00971 595 Pfam NADAR domain 427 580 IPR012816 -
Rops8g00971 595 CDD Riboflavin_deaminase-reductase 36 148 - -
Rops8g00971 595 NCBIfam bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD 37 390 IPR004794 GO:0008835|GO:0009231
Rops8g00971 595 NCBIfam riboflavin-specific deaminase C-terminal domain 185 391 IPR011549 GO:0008703|GO:0009231|GO:0050661
Rops8g00971 595 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 34 129 IPR002125 -
Rops8g00971 595 FunFam Swarming motility protein ybiA 419 584 - -
Rops8g00971 595 SUPERFAMILY Dihydrofolate reductase-like 185 392 IPR024072 -
Rops8g00971 595 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 30 144 IPR002125 -
Rops8g00971 595 SUPERFAMILY YbiA-like 413 582 IPR037238 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00971 K11752 - gmx:100801283 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00971 8 20793786 20799086 Rops8g00971 8 20793786 20799086 ECH