Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00964 ATGGCTCTGAATCTGTGTGTCTCCCCCCCTAAATGTAAATGGGTTGGGTCAAGGCCATCATCACTTTACAGTTCAAAGAATGGGAACTTGAACATTGCTAGTGGTGTGAGTTTAAGTAGTTTTAATAACAGTACAGTGAGTTCAAGGAGGAGTGTGAGTGTGAGATCTAGCTTGGAAACTGCGGGGCCCACTGTGACGGTGGGGCAGGTGACTGAGGTGAACAAGGATACTTTCTGGCCTATTGTTAAGGCTGCCGGAGATAAGACCGTTGTCCTTGACATGTACACTCAATGGTGTGGTCCTTGCAAAGTGATAGCTCCAAAGTTTCAAGAATTATCTGAGAAGTACCTAGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGAAAACAAACCCTTGGCAAAAGAGCTTGGAATTAAAGTGGTTCCTACTTTTAAAATTCTGAAGGACAACAAGGTTGTAAAAGAAGTTACTGGAGCTAAATATGATGATTTGGTCGCTGCCATTGACACTATTCGATCTAGTTAA 528 0.4242 MALNLCVSPPKCKWVGSRPSSLYSSKNGNLNIASGVSLSSFNNSTVSSRRSVSVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELSEKYLDVVFLKLDCNQENKPLAKELGIKVVPTFKILKDNKVVKEVTGAKYDDLVAAIDTIRSS* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00964 175 PANTHER THIOREDOXIN-LIKE PROTEIN 1 69 171 - -
Rops8g00964 175 SUPERFAMILY Thioredoxin-like 63 172 IPR036249 -
Rops8g00964 175 Gene3D Glutaredoxin 54 174 - -
Rops8g00964 175 Pfam Thioredoxin 70 170 IPR013766 -
Rops8g00964 175 ProSitePatterns Thioredoxin family active site. 91 109 IPR017937 -
Rops8g00964 175 ProSiteProfiles Thioredoxin domain profile. 50 174 IPR013766 -
Rops8g00964 175 CDD TRX_family 76 170 - -
Rops8g00964 175 PRINTS Thioredoxin family signature 138 149 - -
Rops8g00964 175 PRINTS Thioredoxin family signature 90 98 - -
Rops8g00964 175 PRINTS Thioredoxin family signature 98 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00964 Rops-Chr8 20712611 20715409 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00964 K03671 - gmx:100499776 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00964 8 20712611 20715409 Rops8g00964 8 20712611 20715409 ECH