Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00962 ATGGCTAGTGGTGTTTCCAATTCGCCATGGATTGTCGTTTTTGTCGTGAGCTTGTCGTTTATGTGGTTGGTGGTGAGTGGTTCAAATTCAACGACGATATACGAAGAGCTTAGGGCTCAAGGGCTTCCTGTGGGGCTTCTTCCAAAGGGAATAACAAAGTATAAGATAAACGACACCAGTGGTGAATTCGAGGTGTTTATGGATGAAGCTTGCAATGCCAAGTTTGAGAACGAGGTTCACTATGATTCCATCATCAAAGGCACTCTTGGTTATGGTCGGATCGGGGAATTATCTGGTGTATCTGCTCAGGAACTCTTCCTATGGTTCCCTGTTAAGGGCATTCGTGTTGATCTACCCAGCTCTGGCCTCATCCACTTTGATGTTGGTGTTGCTGATAAACAATTCTCTGTTTCCCTATTTGAAGACCCACCTGATTGCAATCCTCAGGCTAATGTTGATGCTGGGTTGAGGGCTGCTTGGTAG 483 0.4576 MASGVSNSPWIVVFVVSLSFMWLVVSGSNSTTIYEELRAQGLPVGLLPKGITKYKINDTSGEFEVFMDEACNAKFENEVHYDSIIKGTLGYGRIGELSGVSAQELFLWFPVKGIRVDLPSSGLIHFDVGVADKQFSVSLFEDPPDCNPQANVDAGLRAAW* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00962 160 FunFam Uncharacterized protein At3g07460 19 151 - -
Rops8g00962 160 PANTHER T31J12.3 PROTEIN-RELATED 29 146 IPR007493 -
Rops8g00962 160 SUPERFAMILY At5g01610-like 11 148 IPR036758 -
Rops8g00962 160 Gene3D - 18 151 IPR036758 -
Rops8g00962 160 Pfam Protein of unknown function, DUF538 33 141 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00962 Rops-Chr8 20686834 20688106 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00962 - - gmx:100778787 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00962 8 20686834 20688106 Rops8g00962 8 20686834 20688106 ECH