Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00950 ATGATGGGTTTATGTCCGTGTTTTGGAGATGGAAGATCCGAGAAAGCAGTTTCGGATCGTGACCCGGTTCTACTGGTTTCAGGCATGGGTGGCTCCATCCTCAATTCCAAGCCCAAGAAATTCGGGTTCACCACTCGGGTTTGGGTCAGACTCCTCCTCGCTGACTATGAGTTCCGAAGGAAGATTTGGTCCAAATACAATCCCCAAACAGGTTACACTGAAGAATTAGACACTAAATCTGAAATTGTGGTTCCTGAAAAGGATCATGGTCTCTATGCAATTGATATTTTAGATCCATCATGGTTTACGACATGTATACATTTGACAGAGGTATATCATTTTCATGACATGATTGACATGCTTGTTGAATGTGGGTATGAGAAAGGAACCACATTGTTTGGATATGGATATGATTTCAGGCAAAGCAATAGGATTGATAAGTTAATGGACGGTCTTAAACACAAGTTGGAAACTGCTTACAAAGCCTCTGGAGGAAGAAAAGTGAATTTAATTTCGCACTCCATGGGAGGAATTATGATCTTGTGTTTCATGTCACTTCACAAAGATGTGTTCTCGAAATATGTGAATAAGTGGATTTGCTTGGCTTGCCCTTTCCAAGGAGCCCCGGGGTGCATCAATGATTCTTTATTAACTGGATTAGAGTTTGTTGACGGCTTTGAAAGCTATTTTTTTGTACAAAGGTGGACTATGCATCAATTGCTAGTCGAGTGTCCATCAATCTATGAGATGTTGGCAAATCCAGAATATGAATGGGAAAAGCAGCCAGAAATTCATGTTTGGCGAAAGCATACAAAGAATGGGGATGTTAACATCAATTTGGAATCTTATGGACCAATCCAGACCATCTCTTTATTTGAAGAAGCACTGAGGGACAATGAGCTAAATTATAATGGGAAAATGATACCAGTGCCCTTTAACCTTGCTATCCTCAAATGGGCTGAGGGAACTCGTCAAGTTATATCTAATGCTAAACTGCCAGATGGGGTCAGATTCTATAACATTTATGGGACATCATTTGATACGCCTTTCGACGTCTGCTATGGTTCGGATAAATCTCCACTAGAGGACTTATCTGAAATATGCCGGACAATGCCACAATATTCTTATGTCGATGGAGATGGAACAGTTCCTGCTGAATCAGCCAAGGCCGATGGTCTTGAAGCCATTGAAAGGGTAGGAGTTGCTGCTGAGCACCGTGGACTTCTACGAGATGTAACAGTATTTCAACATATTCAAAAATGGTTGGGTGTTGAGCCATTGGTTAGCAAGCCATATAAGACATCAAAAGTGGCAGATATTGATGCAATCAAGCCTATGATTCTATAA 1347 0.4105 MMGLCPCFGDGRSEKAVSDRDPVLLVSGMGGSILNSKPKKFGFTTRVWVRLLLADYEFRRKIWSKYNPQTGYTEELDTKSEIVVPEKDHGLYAIDILDPSWFTTCIHLTEVYHFHDMIDMLVECGYEKGTTLFGYGYDFRQSNRIDKLMDGLKHKLETAYKASGGRKVNLISHSMGGIMILCFMSLHKDVFSKYVNKWICLACPFQGAPGCINDSLLTGLEFVDGFESYFFVQRWTMHQLLVECPSIYEMLANPEYEWEKQPEIHVWRKHTKNGDVNINLESYGPIQTISLFEEALRDNELNYNGKMIPVPFNLAILKWAEGTRQVISNAKLPDGVRFYNIYGTSFDTPFDVCYGSDKSPLEDLSEICRTMPQYSYVDGDGTVPAESAKADGLEAIERVGVAAEHRGLLRDVTVFQHIQKWLGVEPLVSKPYKTSKVADIDAIKPMIL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00950 448 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 15 424 - -
Rops8g00950 448 Pfam Lecithin:cholesterol acyltransferase 78 388 IPR003386 GO:0006629|GO:0008374
Rops8g00950 448 SUPERFAMILY alpha/beta-Hydrolases 19 395 IPR029058 -
Rops8g00950 448 Gene3D alpha/beta hydrolase 76 423 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00950 Rops-Chr8 20538147 20546543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00950 5 439 Acyl Lipid Metabolism Gene Families AT3G03310 66.818 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00950 K22389 - gmx:100797043 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00950 8 20538147 20546543 Rops8g00950 8 20538147 20546543 ECH