Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00748 ATGGGGTCAGTACTCTCTGCCTTCTTCGGCGGCGGTGGCGGCGGTGGCGAAGGTGAGGCACACGAGGCGGAGGATTCTCGCGTCAAGACATTCCACTCGTCGGCGCGTTGGCAACTCCACTTCAATGACCTCAAAGACTCCTCTCAACTCGTGGTGATTGATTTCTCGGCGTCATGGTGTGGGCCCTGTAAGTTCATAGAGCCAGAGATTCATGGCATGGCTGAAAAATTCACTGATGTTGAATTCATCAAGATCGACGTTGACGAATTATCTGATGTGGCACGGGAGTTTCAGGTGCAGGCAATGCCAACGTTCGTGTTGGTGAAGAAAGGGAAGGAAATTGAGAGGGTTGTTGGGGCTAAGAAGGATGAGCTTTTGAAGAAGGTTGAGAAACACCGAGCTATGCAAGCTTAG 414 0.5145 MGSVLSAFFGGGGGGGEGEAHEAEDSRVKTFHSSARWQLHFNDLKDSSQLVVIDFSASWCGPCKFIEPEIHGMAEKFTDVEFIKIDVDELSDVAREFQVQAMPTFVLVKKGKEIERVVGAKKDELLKKVEKHRAMQA* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00748 137 ProSiteProfiles Thioredoxin domain profile. 17 134 IPR013766 -
Rops8g00748 137 Gene3D Glutaredoxin 16 135 - -
Rops8g00748 137 SUPERFAMILY Thioredoxin-like 41 133 IPR036249 -
Rops8g00748 137 CDD TRX_family 40 130 - -
Rops8g00748 137 PRINTS Thioredoxin family signature 51 59 - -
Rops8g00748 137 PRINTS Thioredoxin family signature 59 68 - -
Rops8g00748 137 PRINTS Thioredoxin family signature 98 109 - -
Rops8g00748 137 PANTHER THIOREDOXIN 28 131 - -
Rops8g00748 137 ProSitePatterns Thioredoxin family active site. 52 70 IPR017937 -
Rops8g00748 137 Pfam Thioredoxin 42 130 IPR013766 -
Rops8g00748 137 FunFam Thioredoxin 27 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00748 Rops-Chr8 15482605 15483451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00748 K03671 - qsu:111992380 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00748 8 15482605 15483451 Rops8g00748 8 15482605 15483451 ECH