Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00744 ATGGCTAAGGGTCCTGGTCTCTACACTGACATCGGCAAGAAAGCCAGGGATCTGTTGTTCAAGGACTATCACAGTGACCAGAAATTCACCATCACCACCTACTCACCCACTGGAGTTGCTATAACATCATCAGGAACCAGGAAAGGTGAACTGTTTGTGGGTGATGTTATCACCCAGTTGAAGAACAACAACATCACTACTGATATCAAAGTAGATACAGATTCTAATCTCTTCACCACTATCACTGTCAATGAGCCTGCTCCTGGTCTGAAGGCTATTTTTAGCTTCAAAGTTCCTGATCAAAGATCTGGAAAGGTGGAACTTCAGTACTTGCATGACTATGCTGGAATATGCAGCAGCATTGGGTTGACAGCAAACCCAATTGTTAACTTCTCTGGTGTTATTGGCACTAATGTTCTTGCTCTTGGTGCTGATCTTACTTATGATACCAAAAGTGGGGAGTTGACAAAATCTAATGCTGGAGTGAGCTTCACCAAAGATGACTTGATTGCATCATTGACTCTGAATGACAAAGGTGATGCGTTGAATGCTTCGTATTACCATGTTGTCAACCCCTTGACCAACACTGCTGTTGGTGCTGAGGTGACTCACAGATTCTCAACTAATGAGAACACCCTTACTCTTGGCACCCAGCATGCATTGGATCCATTGACCACGTTGAAGGCTCGTGTCAATAACTTTGGGAAGGCAAGTGCTCTCATCCAGCATGAGTGGCGTCCCAAATCGTTCTTTACCATTTCTGGGGAGGTAGACACCAAGGCCATTGAAAAGAGTGCTAAGGTTGGATTGGGTTTGGCTCTCAAACCCTAG 831 0.4477 MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTYSPTGVAITSSGTRKGELFVGDVITQLKNNNITTDIKVDTDSNLFTTITVNEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGICSSIGLTANPIVNFSGVIGTNVLALGADLTYDTKSGELTKSNAGVSFTKDDLIASLTLNDKGDALNASYYHVVNPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLGLALKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00744 276 FunFam Outer mitochondrial membrane protein porin 1 275 - -
Rops8g00744 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Rops8g00744 276 Gene3D Porin 1 275 IPR023614 -
Rops8g00744 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Rops8g00744 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Rops8g00744 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00744 Rops-Chr8 15421223 15425095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00744 K15040 - gmx:100170728 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00744 8 15421223 15425095 Rops8g00744 8 15421223 15425095 ECH