Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00723 ATGTCCATTACACAAGATTGTGGAAACCAAGCTATGAAGGATGCTCAAGAAGTAGCCTTTGCTGCAAGCTCAGATTGGCTTGTACTCCAATCACAAGACTGGTTAAACCATGGTGGAGATTTGTTCAATAGAAGATACGCATTCAAAGAGAGTAAGATCAGCCCCAAAACAGCATCAAACCTACGTTTGAAGTGGAAATTCTATGCAGGCAAAGATATCACTGCAACACCAGCCATATTTGATGGTACCCTTTATTTTCCAAGCTGGAATTGTAACATCTATGCAGTTAAAAAAACCGATGGATCACTTGTTTGGAAGCAGAACTTGCCAAAATTGACAGGTCTTAATACGACTGGATTGGTTCCCAATATAAACATGACAGTGTCCAGGTCAACTCCCACTGTGGCCGGGAATCTATTGATTATTACAATCTATGGCCCTGCTGCTGTTATTGGTCTAAAAAGAAGAACTGGTGAGCTTGTGTGGTTGACCCATTTGGATAACCATCCTACAGCAGGTATCACTATGTCTGGAACATACTATAATGGAGGTTACTACGTTGGAGTATCTTCACTAGAGGAAACAAAACCCATTGACCAATGCTGCACATTTCGTGGAAGCTTTGTAAAACTTGATGCCCGATCTGGTGCCACCTTATGGAAGACCTATATGTTACCAGATAACAATGGCAAGAGAGGAGAATATGCAGGAGCTGCCATTTGGGGAAGCAGCCCCTCCATTGATGTTCTCAGAAACCATGTGTATTTTGGTACTGGGAACTCGTATTCTGCCCCATTACGCATACGTCAGTGCCGAGAAAGACAAAATAATCGAACTGAGCCTACTCAACCAGATGAGTGTATTGAACCAGAAAACCACTCCAATTCAATATTGGCCCTTGATTTAGACTCTGGGAATATCAAATGGTACCGCAATTTAGGAGGTTATGATGTAGTTACCGTTCCATGCTTGAATGCTTCAACTCCTAATTGTCCTCCTCTAGGTCTTATCCCAGAAGCTGATTTCGGGGAGGCACCAATGATGTTGACGGCAGATATAAATGGAACCAAAAAAGATATTGTTGCTGCTGTCCAGAAAAGTGGCTATGCATGGGCTTTAGATCGCAACAATGGCAAGCTTGTTTGGGTTACGCAAGCTGGACCGAGTGGGATTACAGGAGGTGGAATATGGGGTGCAGCAACTGATGAAAGGAGGGTTTACACCAACATTGCAAATTCAGAGGCCAAAAATTTCACTCTTGCCCCATCAAAGAATATTATTACAAGGAGTGGTGGGTGGGTGGCAATGGATGCCAGCAATGGCAAGGTTCTATGGTCCACAGCTAACCCCAGTAATAGCACTGCTCATGGCCCTGTTACCGTGGCAAATGAAGTTGTCTTTGCTGGATCTAACGATAGAGTAGGATCCATATATGCTATAAATGCCAAGAATGGAAAAATTTTATGGTCCTATGAAACTGGAGGCAGTGTTTATGGAGGCATGTCAGTTAGCAATGGTTGCATGTATGTGGGTCATGGATATAATGTTGCTCAGGGATTTGTCTATAACTACACAGGTGGAACCTCGCTCTTTGCCTTCTGTGTTTAA 1608 0.4316 MSITQDCGNQAMKDAQEVAFAASSDWLVLQSQDWLNHGGDLFNRRYAFKESKISPKTASNLRLKWKFYAGKDITATPAIFDGTLYFPSWNCNIYAVKKTDGSLVWKQNLPKLTGLNTTGLVPNINMTVSRSTPTVAGNLLIITIYGPAAVIGLKRRTGELVWLTHLDNHPTAGITMSGTYYNGGYYVGVSSLEETKPIDQCCTFRGSFVKLDARSGATLWKTYMLPDNNGKRGEYAGAAIWGSSPSIDVLRNHVYFGTGNSYSAPLRIRQCRERQNNRTEPTQPDECIEPENHSNSILALDLDSGNIKWYRNLGGYDVVTVPCLNASTPNCPPLGLIPEADFGEAPMMLTADINGTKKDIVAAVQKSGYAWALDRNNGKLVWVTQAGPSGITGGGIWGAATDERRVYTNIANSEAKNFTLAPSKNIITRSGGWVAMDASNGKVLWSTANPSNSTAHGPVTVANEVVFAGSNDRVGSIYAINAKNGKILWSYETGGSVYGGMSVSNGCMYVGHGYNVAQGFVYNYTGGTSLFAFCV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00723 535 Pfam PQQ-like domain 372 505 IPR002372 -
Rops8g00723 535 Pfam PQQ-like domain 73 309 IPR002372 -
Rops8g00723 535 Gene3D - 26 519 - -
Rops8g00723 535 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 30 535 - -
Rops8g00723 535 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 29 499 IPR011047 -
Rops8g00723 535 SMART ire1_9 246 312 IPR018391 -
Rops8g00723 535 SMART ire1_9 77 108 IPR018391 -
Rops8g00723 535 SMART ire1_9 352 385 IPR018391 -
Rops8g00723 535 SMART ire1_9 133 165 IPR018391 -
Rops8g00723 535 SMART ire1_9 458 492 IPR018391 -
Rops8g00723 535 SMART ire1_9 419 448 IPR018391 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00723 Rops-Chr8 15086093 15090673 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00723 - - gmx:102669135 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00723 8 15086093 15090673 Rops8g00723 8 15086093 15090673 ECH