Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00722 ATGCCACCGGCTAATTACAGCAGAGAATTAGATTTTTGTTTACTGTTATTTTGTGTTCATGCAACATTAGCCTTTGTTGCAAGCTCAGACTGGGTTAGCCAGCAATCCCAAGATTGGTTAAACCATGGTGGAGATTTGTTCAACAGAAGATATGCCTATAAAGAGAGTAAGATCAGTCCCAAAACAGCACCGAACCTACGTTTAAAGTGGAAATTCTATGCAGGCAAAGATATCTCTGCAACACCAGCCATATATGATGGTACCCTTTATTTTCCAAGCTGGAATGGTAACTTTTATGCAGTTAAACAGGTTGATGGATCTCTTGTTTGGAAGCAGAACTTGCAGAAATTGACAGGTTTAAATACAACTGGGTATGTTACCAATGTAAATTGGACAGTGTCAAGATCAACTCCCACTGTGGTTGGAGATTTGCTGATTACTGGAATCTATGGCCCTGCTGCAGTTGTTGGTCTAAAAAGAAGAACTGGTGAGCTTGTGTGGTTGACCCATTTGGATAACCATCCTACAGCAGGTATCACCATGTCCGGAACATACTACAATGGAGGTTACTATATAGGAGTATCTTCACTAGAAGAAAAAGTACCCATTGAGCAATGCTGCATATTTCGTGGAAGCTTTGCAAAACTTGATGCCCGAGCTGGTGCCATCTTATGGAAGACCTATATGTTACCAGATAACAATAACAAGAGAGGAGGATATGCAGGAGCTGCCATTTGGGGAAGCAGCCCCTCCATTGATGTTCTCAAAAAGCATGTCTATATTGCCACTGGGAACTTATATTCTGCCCCTTTACGTATAATTCAATGTCGTGAAAGACAAAACAATAGAACTGACCCTACTCAACCGGATGAGTGTATTGAACCAGAAAACCACTCCAATTCAATGTTGGCCCTTGATTTGAACTCTGGGAATATCAAATGGTACCGTCAATTGGGAGGCTACGATATATTTACCCTTACATGCTTTTATACTCCAAATCCTAATTGTCCTCCTCAAGGTCTTATCCAGGATGCTGATTTTGGGGAGGCACCAATGATGTTGACTACAAATGTAAATGGAACCAACAAAGATACTGTTGTTGCTGTTCAAAAAAGTGGCTTTGCATGGGCTTTAGATCGCAACAATGGCAAGCTCATTTGGGTTACGGTAGCTGGACCAAGTGGGCTTTCAGGTGGTGGAATATGGGGTGCAGCAACTGATGAAAGGAGGCTTTACACCAACATTGCAAATTCGGATACCAAAATTTTCACTCTTGCGCCGTCAAATAAGACCACAACTAGTGGTGGGTGGGTGGCAATGGATCCCAGTAATGGCAAAGTTCTATGGTCCACAGCTAACCCCAGTAACAGCACTTCTCATGGCCCTGTTACTGTAGCAAATGGAGTTATCTTTGCTGGTTCCACGGATAGAATGGGATCCATATATGCTATTAATGCAAAGAGTGGACAAATTCTATGGTCATATAAAACTGGAGGCAGTGTCTATGGAGGCATGTCAGTTAGCAATGGGTGCATATACGTGGGTCATGGATATACTGTTTCTGTGGGATTTATCTACAACTATACGGGTGGAAACTCACTCTTTGCCTTCTGTGTCTAA 1620 0.4222 MPPANYSRELDFCLLLFCVHATLAFVASSDWVSQQSQDWLNHGGDLFNRRYAYKESKISPKTAPNLRLKWKFYAGKDISATPAIYDGTLYFPSWNGNFYAVKQVDGSLVWKQNLQKLTGLNTTGYVTNVNWTVSRSTPTVVGDLLITGIYGPAAVVGLKRRTGELVWLTHLDNHPTAGITMSGTYYNGGYYIGVSSLEEKVPIEQCCIFRGSFAKLDARAGAILWKTYMLPDNNNKRGGYAGAAIWGSSPSIDVLKKHVYIATGNLYSAPLRIIQCRERQNNRTDPTQPDECIEPENHSNSMLALDLNSGNIKWYRQLGGYDIFTLTCFYTPNPNCPPQGLIQDADFGEAPMMLTTNVNGTNKDTVVAVQKSGFAWALDRNNGKLIWVTVAGPSGLSGGGIWGAATDERRLYTNIANSDTKIFTLAPSNKTTTSGGWVAMDPSNGKVLWSTANPSNSTSHGPVTVANGVIFAGSTDRMGSIYAINAKSGQILWSYKTGGSVYGGMSVSNGCIYVGHGYTVSVGFIYNYTGGNSLFAFCV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00722 539 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 33 503 IPR011047 -
Rops8g00722 539 Gene3D - 26 514 - -
Rops8g00722 539 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 11 539 - -
Rops8g00722 539 SMART ire1_9 462 496 IPR018391 -
Rops8g00722 539 SMART ire1_9 424 452 IPR018391 -
Rops8g00722 539 SMART ire1_9 138 170 IPR018391 -
Rops8g00722 539 SMART ire1_9 82 113 IPR018391 -
Rops8g00722 539 SMART ire1_9 251 317 IPR018391 -
Rops8g00722 539 Pfam PQQ-like domain 68 101 IPR002372 -
Rops8g00722 539 Pfam PQQ-like domain 432 520 IPR002372 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00722 Rops-Chr8 15040263 15043225 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00722 - - gmx:102669135 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00722 8 15040263 15043225 Rops8g00722 8 15040263 15043225 ECH